Entry information : ZmPrx111 (GRMZM2G408963 / Peroxidase 65)
Entry ID 1154
Creation 2007-11-12 (Christophe Dunand)
Last sequence changes 2007-11-12 (Christophe Dunand)
Sequence status complete
Reviewer Michele Oliva
Last annotation changes 2011-01-25 (Christophe Dunand)
Peroxidase information: ZmPrx111 (GRMZM2G408963 / Peroxidase 65)
Name (synonym) ZmPrx111 (GRMZM2G408963 / Peroxidase 65)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type Seedlings
Inducer Dark growth
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx111
start..stop
S start..stop
SbPrx92 555 0 30..334 35..345
SiPrx52 533 0 31..334 33..336
BdiPrx129 493 1e-177 31..334 30..333
OsPrx55 482 7e-173 33..333 35..335
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 40676491..40677495 1005  
join(40676491..40677495)


exon

Literature and cross-references ZmPrx111 (GRMZM2G408963 / Peroxidase 65)
Literature Bohnert,H. et al., unpublished
Protein ref. UniProtKB:   B6SI04   B6U7T0 [Other strain]
DNA ref. GenBank:   AC208617.3 (134653..135655)
mRNA ref. GenBank:   EU952369
Cluster/Prediction ref. UniGene:   Zm.23709
Protein sequence: ZmPrx111 (GRMZM2G408963 / Peroxidase 65)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (309)
PWM (Da):   %s   35714.27 (33139.9)  
PI (pH):   %s   9.8 (9.63) Peptide Signal:   %s   cut: 26 range:26-334
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGPPPRRRQL LLSLALLATA AACCAAGAAP RLSPNYYRRS CPRVERIVSD AVAAKQRANP STAAGTLRLF FHDCFVNGCD ASVLVSPLSS SGAAPERAAE INLSLPGDAF DAVARAKAAL  EAECPGVVSC ADALALAARD LVAALGGPRF PVALGRRDSR RSDARDVEGN LPRTNMSARA MVRLFARKGL SPREMVALAG AHTVGFSHCA EFAPRIYGYR GASHDPRLNP EFARALQRSC 
AGYRTDPTVS IFNDIVTPRD FDETYYKNLP HGLGLLASDA AIWEYPPTRV FAQRYAANRT AFFEDFAAAM QRLGAVGVKT GRQGVVRRRC DALD 

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Remarks Complete sequence from genomic (chromo 2, no intron) and 13 ESTs. Error of sequence in the TGI compile and in the DNA. Strain="B73".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCCCAC CGCCGCGCCG CCGCCAACTC CTGCTGTCTC TCGCGCTGCT CGCCACCGCG GCCGCCTGCT GCGCGGCGGG GGCGGCGCCC AGGCTGTCGC CCAACTACTA CCGCCGCAGC  TGCCCGCGCG TGGAGCGGAT CGTGTCGGAC GCCGTCGCCG CCAAGCAGCG CGCCAACCCG TCCACGGCGG CGGGCACGCT GCGGCTCTTC TTCCACGACT GCTTCGTCAA CGGCTGCGAC  GCCTCGGTGC TGGTCTCGCC GCTCTCCTCC TCCGGCGCCG CGCCGGAGCG CGCCGCGGAG ATCAACCTCT CCCTGCCCGG GGACGCCTTC GACGCCGTGG CCCGCGCCAA GGCGGCGCTG  GAGGCCGAGT GCCCGGGCGT CGTCTCCTGC GCCGACGCGC TGGCGCTGGC GGCGCGCGAC CTCGTGGCCG CCCTGGGCGG GCCCCGGTTC CCCGTCGCGC TGGGCCGCCG CGACTCCCGC  CGCTCCGACG CGCGCGACGT CGAGGGCAAC CTGCCCCGCA CCAACATGTC GGCGCGAGCC ATGGTGCGCC TCTTCGCCCG CAAGGGCCTC TCGCCCCGGG AGATGGTGGC GCTGGCCGGC  GCCCACACCG TCGGCTTCTC CCACTGCGCC GAGTTCGCGC CCCGCATCTA CGGCTACCGG GGCGCCAGCC ACGACCCGCG GCTCAACCCG GAGTTCGCGC GCGCGCTGCA GCGCTCCTGC  GCGGGATACC GCACCGACCC CACCGTCTCC ATCTTCAACG ACATCGTCAC GCCCCGGGAC TTCGACGAGA CCTACTACAA GAACCTGCCC CACGGCCTCG GCCTGCTCGC CTCCGACGCC  GCCATCTGGG AGTACCCGCC CACCAGGGTC TTCGCCCAGC GCTACGCCGC CAACCGCACC GCCTTCTTCG AGGACTTCGC CGCCGCGATG CAGAGGCTCG GCGCCGTCGG CGTCAAGACG 
GGGCGCCAGG GCGTCGTCAG GCGCCGCTGC GACGCGCTCG ACTGA 

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CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCCCAC CGCCGCGCCG CCGCCAACTC CTGCTGTCTC TCGCGCTGCT CGCCACCGCG GCCGCCTGCT GCGCGGCGGG GGCGGCGCCC AGGCTGTCGC CCAACTACTA CCGCCGCAGC  TGCCCGCGCG TGGAGCGGAT CGTGTCGGAC GCCGTCGCCG CCAAGCAGCG CGCCAACCCG TCCACGGCGG CGGGCACGCT GCGGCTCTTC TTCCACGACT GCTTCGTCAA CGGCTGCGAC  GCCTCGGTGC TGGTCTCGCC GCTCTCCTCC TCCGGCGCCG CGCCGGAGCG CGCCGCGGAG ATCAACCTCT CCCTGCCCGG GGACGCCTTC GACGCCGTGG CCCGCGCCAA GGCGGCGCTG  GAGGCCGAGT GCCCGGGCGT CGTCTCCTGC GCCGACGCGC TGGCGCTGGC GGCGCGCGAC CTCGTGGCCG CCCTGGGCGG GCCCCGGTTC CCCGTCGCGC TGGGCCGCCG CGACTCCCGC  CGCTCCGACG CGCGCGACGT CGAGGGCAAC CTGCCCCGCA CCAACATGTC GGCGCGAGCC ATGGTGCGCC TCTTCGCCCG CAAGGGCCTC TCGCCCCGGG AGATGGTGGC GCTGGCCGGC  GCCCACACCG TCGGCTTCTC CCACTGCGCC GAGTTCGCGC CCCGCATCTA CGGCTACCGG GGCGCCAGCC ACGACCCGCG GCTCAACCCG GAGTTCGCGC GCGCGCTGCA GCGCTCCTGC  GCGGGATACC GCACCGACCC CACCGTCTCC ATCTTCAACG ACATCGTCAC GCCCCGGGAC TTCGACGAGA CCTACTACAA GAACCTGCCC CACGGCCTCG GCCTGCTCGC CTCCGACGCC  GCCATCTGGG AGTACCCGCC CACCAGGGTC TTCGCCCAGC GCTACGCCGC CAACCGCACC GCCTTCTTCG AGGACTTCGC CGCCGCGATG CAGAGGCTCG GCGCCGTCGG CGTCAAGACG 
GGGCGCCAGG GCGTCGTCAG GCGCCGCTGC GACGCGCTCG ACTGA 

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