Entry information : EguPrx[P]14
Entry ID 11567
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EguPrx[P]14
Name EguPrx[P]14
Class Class III peroxidase     [Orthogroup: Prx046]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]14
start..stop
S start..stop
EglPrx[P]14 372 4e-134 1..187 1..187
EgrPrx[P]14 366 4e-132 1..187 1..187
EgrPrx[P]03 337 8e-121 1..173 1..173
EcamPrx[P]03 255 5e-89 1..134 1..133
Literature and cross-references EguPrx[P]14
Protein sequence: EguPrx[P]14
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185
PWM (Da):   %s   20240.21  
PI (pH):   %s   6.98
Sequence
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Send to Peroxiscan
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MSSCSVWHNI EAAATIKPP* KLQWLYYQNL CPDAKKYMxD HVEFYWKEDR TLAPNLI*LF YFDCFVGCDA LILFNGPDSK KTASQNAPLL GLPMETIDKA KEVLEHHCPG VVSCADIINL 
AARDAVVLVC NMVCRMSHPF STGRRDENSS SAKSVDLPLQ AVLGKAVLAY FKSxRGLNVL DLTTLLG 

Retrieve as FASTA  
Remarks Pseudogene from genomic (stop codon in frame, last exon is missing). Scaffold_1_269 (3038..3913)
DNA
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ATGAGCTCAT GCTCAGTGTG GCACAACATC GAGGCAGCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGnGAC  CATGTTGAGT TTTATTGGAA GGAAGACAGG ACnCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCAC CGTACGTGTC ATATGTTTTT TTTCCCTTTC CCAGACGATC  TTGAACTCCn CATCGCTnnn ATCGCTTCAA TATCAGGTTT CCATCGCCTT TCTAAGCACA TGATACCCTT TCACCTAACG GTTTGAACCT CTCAAACCGG GCTTTCTAAT GTACCAGCTT  TTGTAAAACA AGGGTGTGAT GCGTTGATTC TATTCAATGG GCCAGATTCA AAGAAAACAG CATCGCAAAA TGCACCGCTT CTAGGGCTTC CTATGGAGAC GATTGACAAG GCCAAGGAAG  TCCTGGAACA CCATTGTCCC GGGGTAGTAT CTTGCGCCGA CATAATCAAC CTTGCTGCTA GAGATGCTGT TGTCTTGGTA TGCAACATGG TTTGCAGnTT TTTTACTTTT TGAGCTTGAA  AAGAGATCGT TTAGGCTGCT GCACTGATGA TTGACATGCT GTTAGCTTGA GTTTTGGAGC GTTCGATATG GAAAAAAATT AGAATTATTG ATGCAATAAT GATGCTGCGA CATGCGGGAG  GGATGTCGCA CCCCTTTTCG ACGGGGAGAA GGGACGAGAA TTCATCCTCC GCAAAGTCAG TGGACCTCCC GTTGCAGGCT GTCCTGGGGA AAGCGGTGCT CGCTTACTTC AAATCAAnnA 
GGGGTTTGAA TGTGCTAGAC CTCACTACTC TACTTGGC 

Retrieve as FASTA  
CDS
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ATGAGCTCAT GCTCAGTGTG GCACAACATC GAGGCAGCAG CAACAATCAA ACCGCCGTAG AAGTTGCAGT GGCTTTACTA CCAAAATTTG TGCCCTGACG CCAAGAAGTA CATGTGnGAC  CATGTTGAGT TTTATTGGAA GGAAGACAGG ACnCTCGCTC CCAATCTCAT CTAACTATTT TACTTCGATT GCTTCGTCGG GTGTGATGCG TTGATTCTAT TCAATGGGCC AGATTCAAAG  AAAACAGCAT CGCAAAATGC ACCGCTTCTA GGGCTTCCTA TGGAGACGAT TGACAAGGCC AAGGAAGTCC TGGAACACCA TTGTCCCGGG GTAGTATCTT GCGCCGACAT AATCAACCTT  GCTGCTAGAG ATGCTGTTGT CTTGGTATGC AACATGGTTT GCAGGATGTC GCACCCCTTT TCGACGGGGA GAAGGGACGA GAATTCATCC TCCGCAAAGT CAGTGGACCT CCCGTTGCAG 
GCTGTCCTGG GGAAAGCGGT GCTCGCTTAC TTCAAATCAA nnAGGGGTTT GAATGTGCTA GACCTCACTA CTCTACTTGG C 

Retrieve as FASTA