Entry information : EguPrx[P]143
Entry ID 11570
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-04-07 (Christophe Dunand)
Peroxidase information: EguPrx[P]143
Name EguPrx[P]143
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]143
start..stop
S start..stop
EguPrx144 245 4e-83 1..138 20..201
EgrPrx144 241 2e-81 1..138 20..201
EcamPrx144 237 4e-80 1..138 1..182
EgrPrx[P]143 214 2e-73 1..120 1..120
Literature and cross-references EguPrx[P]143
Protein sequence: EguPrx[P]143
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   142 (126)
PWM (Da):   %s   14894.5 (13176.7)  
PI (pH):   %s   5.15 (4.84) Peptide Signal:   %s   cut: 17 range:17-142
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLVLLCMSCH AQLSSTFYDE SCPDALAAIR TSIRxTNRGS VRGYEVIDDA KSEVEKICPG VVSCADIVAV AARDASVAVG SPSWTVKLGR RDSTTASPSL ASSDLPSFQD GLERLVSRFA 
IKGLSARDMV ALSGIYEMLI QT 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Both 5' and 3' ends are missing). Scaffold_9_33202 (1672..988)
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTAGTGC TCCTGTGCAT GTCCTGCCAT GCGCAGCTTT CCTCCACGTT TTACGATGAG TCGTGCCCCG ATGCCCTCGC CGCGATTCGG ACTTCCATCA GAnnnACCGC AGTCTCGAGG  GAGCGCCGGA TGGCTGCTTC TCTCATCCGA CTCCATTTCC ACGATTGCTT TGTCCAGGGT TGTGATGCGT CGATACTGCT GGAGAATAGC CCCACCATCT CTAGCGAGAA AGACGTGGGG  CCAAACAGAG GCTCCGTGAG AGGTTACGAG GTGATTGACG ACGCCAAGTC CGAAGTGGAG AAGATCTGTC CAGGAGTCGT GTCTTGCGCG GATATTGTTG CCGTCGCAGC TCGAGATGCT  TCTGTTGCCG TAAGTCTTCC CATAGTTCTC AAGATATGCA TCTTATGATC ACTTGATTAC TTTCAAATAT CGACTACGAG TTTAAATCAT TTTCCTTACT GATATAACTG ATGCTGCTGT  GACAAAAATG TAGGTTGGCA GTCCTTCTTG GACGGTGAAG CTCGGAAGAA GAGACTCGAC CACCGCAAGC CCATCTCTCG CGTCAAGCGA TCTTCCATCG TTTCAAGATG GCCTTGAGAG 
ACTCGTATCT CGATTTGCAA TCAAGGGCCT TAGTGCTAGA GACATGGTTG CCCTCTCAGG TATATACGAA ATGCTTATTC AAACCTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTAGTGC TCCTGTGCAT GTCCTGCCAT GCGCAGCTTT CCTCCACGTT TTACGATGAG TCGTGCCCCG ATGCCCTCGC CGCGATTCGG ACTTCCATCA GAnnnACCAA CAGAGGCTCC  GTGAGAGGTT ACGAGGTGAT TGACGACGCC AAGTCCGAAG TGGAGAAGAT CTGTCCAGGA GTCGTGTCTT GCGCGGATAT TGTTGCCGTC GCAGCTCGAG ATGCTTCTGT TGCCGTTGGC  AGTCCTTCTT GGACGGTGAA GCTCGGAAGA AGAGACTCGA CCACCGCAAG CCCATCTCTC GCGTCAAGCG ATCTTCCATC GTTTCAAGAT GGCCTTGAGA GACTCGTATC TCGATTTGCA 
ATCAAGGGCC TTAGTGCTAG AGACATGGTT GCCCTCTCAG GTATATACGA AATGCTTATT CAAACCTGA 

Retrieve as FASTA