Entry information : EguPrx[P]159
Entry ID 11572
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-12 (Christophe Dunand)
Peroxidase information: EguPrx[P]159
Name EguPrx[P]159
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]159
start..stop
S start..stop
EgrPrx[P]159 435 1e-157 1..242 1..240
EcamPrx[P]159 414 3e-149 2..240 1..246
EguPrx[P]160 400 8e-144 1..219 1..243
EgrPrx[P]160 394 4e-141 1..219 1..243
Literature and cross-references EguPrx[P]159
Protein sequence: EguPrx[P]159
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   242
PWM (Da):   %s   24945.26  
PI (pH):   %s   4.28
Sequence
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Send to Peroxiscan
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QGCNASVLLD GSTSEPSEQD TPPNRNLRCT ALQIxDLCDL VEKKCGRVVS CADIATIAAH DSIFLxGRPE YDVPLGRRDE LAxASVNETT KNLPSPAQSA SQILAxLAKK SFDATNVLGH  CGSFTxxLYP TPDPTMEKxF ARAxxxxCPT TNSTNTTVLD IQSPNRFTSD QDQYEDPTTR DIVTSFAKDL ELFFERFVLA MTKMGQLGLL TGTKGEIxSP LLGQEFLETL FPDDPEYLCP 
SK 

Retrieve as FASTA  
Remarks Pseudogene from genomic (first exon and 3'end are missing, frame shift). join(27302..27495,27565..27720,27751..27890,27931..28157)
scaffold_10_35080 (27302..28157)
DNA
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CAGGGATGCA ATGCTTCGGT GTTGCTGGAT GGATCAACGA GTGAACCGAG CGAGCAGGAC ACCCCACCGA ATCGAAACTT GAGATGCACA GCGCTCCAAA TCATnGACCT GTGCGACCTC  GTGGAGAAGA AATGTGGTCG GGTAGTCTCT TGTGCTGACA TCGCCACCAT CGCCGCTCAC GATTCCATTT TCTTGGTAAA GTTGGATTTC TTTATCGGGG ATTAATTGTA AATAATGTGA  CCATGCATAA TATACCGTGT GCAGTnGGGC AGACCTGAGT ATGACGTGCC ATTGGGAAGG CGTGACGAAC TCGCTTnCGC GTCnGTAAAC GAGACCACAA AGAATTTACC TTCACCAGCT  CAGAGCGCCA GCCAAATTCT CGCTnCCCTA GCCAAGAAAA GCTTCGACGC CACCAATGTA GTGACACTCT CTGGAGCCCA CACCATCGGG CTTGGGCACT GTGGTAGCTT CACCnACCnG  CTCTACCCGA CCCCAGACCC CACnATGGAG AAAAGnTTCG CCCGTGCATG nnnnnnnnnn TGCCCCACTA CAAACTCCAC GAACACCACA GTCCTGGACA TCCAATCGCC CAACCGATTC  GACAACAGGT ACTTTGTCAA TTTGGTGAAC CGGCCTGTTC ACGTCGGACC AAGATCAATA TGAGGACCCC ACnACGAGGG ACATCGTTAC TAGCTTCGCC AAGGACCTGG AATTGTTCTT  CGAGAGGTTT GTTCTCGCTA TGACCAAGAT GGGGCAGCTT GGCCTGTTGA CTGGGACGAA AGGAGAAATC CAnAGCCCGC TGCTCGGCCA GGAATTCCTA GAAACGCTTT TTCCTGATGA 
CCCCGAATAT TTATGTCCTT CTAAATAA 

Retrieve as FASTA  
CDS
Send to BLAST
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CAGGGATGCA ATGCTTCGGT GTTGCTGGAT GGATCAACGA GTGAACCGAG CGAGCAGGAC ACCCCACCGA ATCGAAACTT GAGATGCACA GCGCTCCAAA TCATnGACCT GTGCGACCTC  GTGGAGAAGA AATGTGGTCG GGTAGTCTCT TGTGCTGACA TCGCCACCAT CGCCGCTCAC GATTCCATTT TCTTGTnGGG CAGACCTGAG TATGACGTGC CATTGGGAAG GCGTGACGAA  CTCGCTTnCG CGTCnGTAAA CGAGACCACA AAGAATTTAC CTTCACCAGC TCAGAGCGCC AGCCAAATTC TCGCTnCCCT AGCCAAGAAA AGCTTCGACG CCACCAATGT ACTTGGGCAC  TGTGGTAGCT TCACCnACCn GCTCTACCCG ACCCCAGACC CCACnATGGA GAAAAGnTTC GCCCGTGCAT Gnnnnnnnnn nTGCCCCACT ACAAACTCCA CGAACACCAC AGTCCTGGAC  ATCCAATCGC CCAACCGATT CACGTCGGAC CAAGATCAAT ATGAGGACCC CACnACGAGG GACATCGTTA CTAGCTTCGC CAAGGACCTG GAATTGTTCT TCGAGAGGTT TGTTCTCGCT  ATGACCAAGA TGGGGCAGCT TGGCCTGTTG ACTGGGACGA AAGGAGAAAT CCAnAGCCCG CTGCTCGGCC AGGAATTCCT AGAAACGCTT TTTCCTGATG ACCCCGAATA TTTATGTCCT 
TCTAAATAA 

Retrieve as FASTA