Entry information : EguPrx[P]162
Entry ID 11573
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-04-07 (Christophe Dunand)
Peroxidase information: EguPrx[P]162
Name EguPrx[P]162
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]162
start..stop
S start..stop
EcamPrx[P]162 525 0 1..290 7..296
EgrPrx[P]164 519 0 1..289 1..291
EgrPrx[P]162 514 0 1..290 1..290
EguPrx[P]164 505 0 1..289 1..291
Literature and cross-references EguPrx[P]162
Protein sequence: EguPrx[P]162
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   289
PWM (Da):   %s   29241.84  
PI (pH):   %s   8.38
Sequence
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Send to Peroxiscan
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MGIVLGFLGN AAVSTQAQLE MxYYSKSCPE AEKIVRELSK xHIRNAHSLA AALLRxHxHD xxVGCDASVL FNSS*SNPAE RDSPxNFTxR GFDFIDRVKS LVxxExPGIV SCADIIALAA  RDAIVAxGGP FWRVPTVRRD GVISRASEAL SNIPSPSSKL NAPQxFFANK GLDLKDLVLS SGAHTIGASH CSSFRNHLYN FTGGEDQDPS LESGYAANLK AKKCRSLSND TIFRSDSAIT 
TSPATKLFIx QVLQGSLDNx YAQFALAMEK MGRxDVKTGL AGEIRKHCAL 

Retrieve as FASTA  
Remarks Pseudogene from genomic. (5' end is missing; stops in frame; PS is missing). Scaffold_11_36238 (20075..21463)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCATTG TTTTGGGTTT TCTAGGGAAT GCnGCTGTCT CAACTCAAGC TCAACTTGAG ATGnnTTATT ATTCTAAGAG CTGCCCAGAA GCTGAAAAAA TTGTGAGAGA GTTGTCGAAG  ATnCACATCC GCAATGCTCA TTCTTTAGCA GCCGCTCTGC TGAGGAnGCA CnTTCATGAT TnCTTnGTnn GGGTTTTTAC TTTCTCTCCC ATGTAGCTTG CATCAGnGCA CGTTAATATC  TTACAGTAAA CTTGAGAAAT TTGGAGGAAT CATTACTGCA TATCTCCATT TCAAGAGTAC TnGTATTTTC TTAATCTCAT GCTAGCTTTG AGAAATTTGA GCTCGTnGTT TGTTGATCAC  CGTCAGGGTT GTGATGCTTC TGTGCTCTTC AACTCTAGTT GAAGCAACCC AGCAGAGAGA GATTCTCCTC nAAACTTCAC TnTGAGAGGC TTTGACTTCA TCGATCGAGT GAAGAGCCTT  GTCnAAGnTG AATnCCCCGG GATTGTCTCT TGCGCAGACA TCATAGCTTT GGCCGCAAGA GATGCAATAG TGGCCnCTAT nAGGACAACA GCACAAAGAT TATTTCCACG AAAGCAGATA  TCCATTGTnC AAGTGCGTCT AGATCTTAAC ACTATGTGAA AACTGTTTTC TCCACTGATG ATGnAATGAG nATAGATTTG CAAGCGAAAA AAnCATTGAG ATTGAGTGGG GAATTAAAAC  TGTATCTGAT nTGCATGAAA CTATAGGGAG GTCCATTTTG GAGAGTTCCT ACAGTAAGAA GAGATGGAGT GATTTCAAGG GCATCGGAAG CATTGAGCAA CATCCCTTCT CCATCCAGCA  AACTCAACGC TCCCCAAAnA TTTTTCGCCA ATAAAGGACT CGATCTTAAA GACTTAGTTT TATCGTCCGG TGAGGCCATA TGTCACCCAC CTATAAAAAT GAGAGGATAT CAGTTGATGA  GTTAAACCAT TAGTATCGAG AGAnATCGAA nTGTATATTC AGTACGnGAC TAAGCTGGTC ATGTGCTAAA TTAGTAGTGG CTGATGTGAC TTGTTCTGAn ATAGGAGCTC ACACGATTGG  TGCATCTCAC TGCTCGTCTT TCCGGAACCA CCTATACAAC TTCACTGGCG GTGAGGATCA AGACCCnTCC TTGGAAAGCG GGTACGCGGC GAATCTCAAG GCCAAGAAGT GCAGGAGCCT  GAGTAACGAT ACCATCTTTC GATCGGATTC TGCTATCACT ACCAGTCCTG CTACCAAGCT CTTCATCAnA CAAGTCCTTC AAGGGTCACT TGACAACTTn TACGCTCAAT TTGCCTTGGC 
AATGGAGAAG ATGGGCCGGA TnGACGTGAA GACTGGGCTG GCGGGCGAGA TAAGGAAGCA TTGTGCGCTG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCATTG TTTTGGGTTT TCTAGGGAAT GCnGCTGTCT CAACTCAAGC TCAACTTGAG ATGnnTTATT ATTCTAAGAG CTGCCCAGAA GCTGAAAAAA TTGTGAGAGA GTTGTCGAAG  ATnCACATCC GCAATGCTCA TTCTTTAGCA GCCGCTCTGC TGAGGAnGCA CnTTCATGAT TnCTTnGTnG GTTGTGATGC TTCTGTGCTC TTCAACTCTA GTTGAAGCAA CCCAGCAGAG  AGAGATTCTC CTCnAAACTT CACTnTGAGA GGCTTTGACT TCATCGATCG AGTGAAGAGC CTTGTCnAAG nTGAATnCCC CGGGATTGTC TCTTGCGCAG ACATCATAGC TTTGGCCGCA  AGAGATGCAA TAGTGGCCnC TGGAGGTCCA TTTTGGAGAG TTCCTACAGT AAGAAGAGAT GGAGTGATTT CAAGGGCATC GGAAGCATTG AGCAACATCC CTTCTCCATC CAGCAAACTC  AACGCTCCCC AAAnATTTTT CGCCAATAAA GGACTCGATC TTAAAGACTT AGTTTTATCG TCCGGAGCTC ACACGATTGG TGCATCTCAC TGCTCGTCTT TCCGGAACCA CCTATACAAC  TTCACTGGCG GTGAGGATCA AGACCCnTCC TTGGAAAGCG GGTACGCGGC GAATCTCAAG GCCAAGAAGT GCAGGAGCCT GAGTAACGAT ACCATCTTTC GATCGGATTC TGCTATCACT  ACCAGTCCTG CTACCAAGCT CTTCATCAnA CAAGTCCTTC AAGGGTCACT TGACAACTTn TACGCTCAAT TTGCCTTGGC AATGGAGAAG ATGGGCCGGA TnGACGTGAA GACTGGGCTG 
GCGGGCGAGA TAAGGAAGCA TTGTGCGCTG 

Retrieve as FASTA