Entry information : EguPrx[P]164
Entry ID 11574
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EguPrx[P]164
Name EguPrx[P]164
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]164
start..stop
S start..stop
EgrPrx[P]164 566 0 1..293 1..293
EguPrx[P]162 505 0 1..291 1..289
EcamPrx[P]162 503 0 1..291 7..295
EglPrx[P]162 498 0 1..288 1..280
Literature and cross-references EguPrx[P]164
Protein sequence: EguPrx[P]164
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   292 (275)
PWM (Da):   %s   30817.71 (29145.8)  
PI (pH):   %s   8.8 (8.80) Peptide Signal:   %s   cut: 18 range:18-292
Sequence
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Send to Peroxiscan
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MGIVLGFLGN IAVSTQAQLE MGYYSKSCPE AEKIVRxVVE DHIRNAHSLA AALLRMHFHD LLRRQGCxAS VLLNSS*SNP AERDSPxNFT VRGxDFIDRx KSLVEAEYAR IVSCADIIAL  xARDAIVATG GPFWRVPxVR RxGVISRASE ALSNIPSPSS KLNAPQIFFA NKGLDLKDLV LSSGAHMIGA SHCSSFRNHL YNFTGGEDQD PSLESGYAAN LKAKNCRSLS NDTIFRSDSA 
ITTSPATKLF ITQVLQGSLD NFYAQFVMAM EKMGRIDVKT RLAGEIRKHC AGE 

Retrieve as FASTA  
Remarks Pseudogene from genomic (stop codon in frame and missing fragment in exon 4). Scaffold_11_36240 (9818..11197)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCATTG TTTTGGGTTT TCTAGGGAAT ATTGCTGTCT CAACTCAAGC TCAACTTGAG ATGGGTTATT ATTCTAAGAG CTGCCCAGAA GCTGAAAAAA TTGTGAGAGA nGTTGTCGAA  GATCACATCC GTAATGCTCA TTCTTTAGCA GCCGCTCTGC TGAGGATGCA CTTTCATGAT TTGCTTCGTC GGGGTTTTTA CTTTCTCTCC CATGTAGCTT GCATCAGTGC ACGTTAATAT  CTTACAGCAA ACTTGAGAAA TTTGGAGAAT CATTACTGCA TATCTACATT TCAAGAGTAC TAGTATTTTC TTAATCTCAT GCTAGCTTTG AGAAATTTGA GCTCGTCGTT TGTTGATCAC  CGTCAGGGTT GTGAnGCTTC TGTGCTCTTG AACTCTAGTT GAAGCAACCC AGCAGAGAGA GATTCTCCTC nAAACTTCAC TGTGAGAGGC nTnGACTTCA TCGATCGAGn GAAGAGCCTT  GTCGAAGCTG AATATGCCAG GATTGTCTCT TGCGCAGACA TCATAGCTTT GnCCGCAAGA GATGCAATAG TGGCCACTAT AAGGACAACA GCACAAAGAT TATTTCCACG AAAGCAGATA  TCCATTGTTC AAGTGCGTCT AGATCTTAAC ACTATGTGAA AACTGTTTTC TCCACTGATG ATGGAATGAG TATAGATTTG CCAGCGAAAC ATTGAGATTG AGTGGGGAAT TAAAACTGTA  TCTGATGTGC ATGAAACTAT AGGGAGGTCC ATTTTGGAGA GTTCCTnCnG TAAGAAGAnA nGGAGTnATT TCAAGGGCAT CGGAAGCATT GAGCAACATC CCTTCTCCAT CCAGCAAACT  CAACGCTCCC CAAATATTTT TCGCCAATAA AGGACTCGAT CTTAAAGACT TAGTTTTATC GTCCGGTGAG GCCATATGTC ACCCACCTAT AAAAATGAGA GGATATCAGT TGATGAGTTA  AACCATTAGT ATCGAGAGAT ATCGAAATGT ATATTCAGTA CGTTAGTCAT GTGCTAAATT AGTAGTGGCT GATGTGACTT GTTCTGACAT TGGAGCTCAC ATGATTGGTG CATCTCACTG  CTCGTCTTTC CGGAACCACC TATACAACTT CACTGGCGGT GAGGATCAAG ATCCCTCCTT GGAAAGCGGG TACGCGGCGA ATCTCAAGGC CAAGAATTGT AGGAGCCTGA GTAATGATAC  CATCTTTCGA TCGGATTCTG CTATCACTAC CAGTCCTGCT ACCAAGCTCT TCATCACACA AGTCCTTCAA GGGTCACTTG ACAACTTCTA CGCTCAATTT GTTATGGCAA TGGAGAAGAT 
GGGCCGGATC GACGTGAAGA CTAGGCTGGC GGGCGAGATA AGGAAGCATT GTGCTGGTGA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCATTG TTTTGGGTTT TCTAGGGAAT ATTGCTGTCT CAACTCAAGC TCAACTTGAG ATGGGTTATT ATTCTAAGAG CTGCCCAGAA GCTGAAAAAA TTGTGAGAGA nGTTGTCGAA  GATCACATCC GTAATGCTCA TTCTTTAGCA GCCGCTCTGC TGAGGATGCA CTTTCATGAT TTGCTTCGTC GGCAGGGTTG TGAnGCTTCT GTGCTCTTGA ACTCTAGTTG AAGCAACCCA  GCAGAGAGAG ATTCTCCTCn AAACTTCACT GTGAGAGGCn TnGACTTCAT CGATCGAGnG AAGAGCCTTG TCGAAGCTGA ATATGCCAGG ATTGTCTCTT GCGCAGACAT CATAGCTTTG  nCCGCAAGAG ATGCAATAGT GGCCACTGGA GGTCCATTTT GGAGAGTTCC TnCnGTAAGA AGAnAnGGAG TnATTTCAAG GGCATCGGAA GCATTGAGCA ACATCCCTTC TCCATCCAGC  AAACTCAACG CTCCCCAAAT ATTTTTCGCC AATAAAGGAC TCGATCTTAA AGACTTAGTT TTATCGTCCG GTGCTCACAT GATTGGTGCA TCTCACTGCT CGTCTTTCCG GAACCACCTA  TACAACTTCA CTGGCGGTGA GGATCAAGAT CCCTCCTTGG AAAGCGGGTA CGCGGCGAAT CTCAAGGCCA AGAATTGTAG GAGCCTGAGT AATGATACCA TCTTTCGATC GGATTCTGCT  ATCACTACCA GTCCTGCTAC CAAGCTCTTC ATCACACAAG TCCTTCAAGG GTCACTTGAC AACTTCTACG CTCAATTTGT TATGGCAATG GAGAAGATGG GCCGGATCGA CGTGAAGACT 
AGGCTGGCGG GCGAGATAAG GAAGCATTGT GCTGGTGAA 

Retrieve as FASTA