Entry information : EguPrx[P]170
Entry ID 11577
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EguPrx[P]170
Name EguPrx[P]170
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]170
start..stop
S start..stop
EgrPrx[P]170 276 2e-97 1..152 1..161
EcamPrx[P]170 267 6e-94 1..149 1..158
EglPrx[P]170 196 1e-66 54..152 1..108
EcamPrx[P]166 166 3e-53 1..152 42..220
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1560..2018 459  
complement(join(1560..2018))


exon

Literature and cross-references EguPrx[P]170
Protein sequence: EguPrx[P]170
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   152
PWM (Da):   %s   16929.4  
PI (pH):   %s   7.58
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
SWQVQxGRRI SSMMRLTAAN TDILAPTLNF NDLITSFSNN GFTTKEMMAL SESHAIGNAR CTTIQSWLYN ESNINLSFAP PPWHHEPYVL RQFRNLVNQK GLLHLDLQLF SGNSMNDQVT 
IYINILNLFS SDFANAMVKM GGLSPLNCRE VN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (5' and 3' end are missing).
scaffold_11_36687 (2018..1560)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGTTGGCAAG TTCAGnnnGG AAGAAGAATT TCGTCCATGA TGAGGCTAAC CGCCGCTAAT ACTGATATCC TAGCTCCAAC TCTTAATTTC AACGACCTCA TCACTTCTTT CTCCAACAAT  GGGTTCACTA CCAAAGAAAT GATGGCACTC TCGGAATCCC ACGCCATAGG CAACGCTAGG TGCACAACGA TCCAATCCTG GCTCTACAAT GAGAGCAACA TAAACTTGTC GTTCGCCCCA  CCCCCGTGGC ATCATGAGCC CTACGTCCTT CGACAATTCC GTAACTTGGT GAACCAAAAG GGCCTACTCC ACTTGGATCT GCAATTGTTC AGTGGGAATT CAATGAACGA TCAAGTGACC 
ATCTACATCA ACATTTTGAA TTTGTTCTCG AGCGACTTTG CTAATGCCAT GGTCAAGATG GGAGGCCTTA GCCCTCTCAA TTGCAGGGAG GTCAATTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGTTGGCAAG TTCAGnnnGG AAGAAGAATT TCGTCCATGA TGAGGCTAAC CGCCGCTAAT ACTGATATCC TAGCTCCAAC TCTTAATTTC AACGACCTCA TCACTTCTTT CTCCAACAAT  GGGTTCACTA CCAAAGAAAT GATGGCACTC TCGGAATCCC ACGCCATAGG CAACGCTAGG TGCACAACGA TCCAATCCTG GCTCTACAAT GAGAGCAACA TAAACTTGTC GTTCGCCCCA  CCCCCGTGGC ATCATGAGCC CTACGTCCTT CGACAATTCC GTAACTTGGT GAACCAAAAG GGCCTACTCC ACTTGGATCT GCAATTGTTC AGTGGGAATT CAATGAACGA TCAAGTGACC 
ATCTACATCA ACATTTTGAA TTTGTTCTCG AGCGACTTTG CTAATGCCAT GGTCAAGATG GGAGGCCTTA GCCCTCTCAA TTGCAGGGAG GTCAATTGA 

Retrieve as FASTA