Entry information : EguPrx[P]172
Entry ID 11579
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2016-03-23 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-03-23 (Achraf Jemmat)
Peroxidase information: EguPrx[P]172
Name EguPrx[P]172
Class Class III peroxidase     [Orthogroup: Prx074]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]172
start..stop
S start..stop
EgrPrx[P]172 506 0 15..293 1..279
EgrPrx167 421 1e-149 1..284 18..306
EguPrx167 410 2e-145 1..284 18..306
EcamPrx200 404 3e-143 1..284 18..306
Literature and cross-references EguPrx[P]172
Protein sequence: EguPrx[P]172
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   291
PWM (Da):   %s   30147.04  
PI (pH):   %s   8.12
Sequence
Send to BLAST
Send to Peroxiscan
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IxSTSTSTQL SEENYYAAKC PKALETVRSN VKAAVAKEAH MGASLLRLHF HNYFVNGCDA SILLDDTTNF IGEKTALPNA NSVRRFxLID TIKLEVEKLC PGVVLCADIL AIAARDSVVA  LGGPS*QV*L GRRVxTMANx SAANTNLPSP KLNLSDLIxA FTNKGFTAQE MVALSGSHTI GxARCTTFRD QLYNESNMNx SFAAPSKANC PNSGGDNNLS PPMSFDNGYF RNLVSQKGLL 
HSDQQLFSxG STNAQMTAYN KNFGSFQKDF AKAVVxMGSL SPLTDYPSLI FGN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Both 5' end and 3' end are missing, stops in frame). Scaffold_11_36687 (7565..8619)
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATCnnATCGA CCTCTACCTC GACACAATTG TCCGAGGAGA ACTACTACGC AGCAAAGTGC CCGAAGGCAC TTGAGACCGT GAGATCCAAC GTGAAGGCGG CGGTGGCCAA GGAGGCTCAC  ATGGGAGCAT CCTTGCTCCG ACTTCACTTT CACAACTACT TCGTCAATGT AAGTGTCTTC CGCTTTCTAG CTCTATTCAA ACCGTCTTCT TTTTTTCATC TAATATTAAC GAAAGTTATT  TTTAATTTGT TTTATAGGGA TGTGATGCAT CCATTCTACT AGACGATACA ACGAACTTCA TCGGnGAGAA GACAGCCCTT CCCAATGCAA ACTCTGTGAG AAGATTCnAC TTGATCGACA  CCATCAAGTT GGAAGTAGAG AAGTTATGCC CCGGTGTTGT CTTGTGCGCT GACATCTTAG CCATTGCTGC TAGGGACTCC GTTGTCGCAG TAAGTGCCAA CCCTTGAAAT TTCTTGAAAC  ATCCACAGAG GCTATTATTT TTCCTGAACT TATTAGGATT CAATTTTTGA TGTGTAGTTG GGTGGACCGA GTTGACAAGT TTAGCTCGGA AGAAGGGTTT nGACCATGGC GAACGnAAGT  GCTGCTAATA CCAACCTTCC ATCTCCAAAG CTAAATCTCA GCGACCTCAT CAnCGCTTTC ACCAACAAAG GGTTCACTGC CCAAGAAATG GTGGCACTCT CAGGATCTCA CACCATAGGC  nAGGCTAGGT GCACnACATT CCGGGACCAG CTCTACAACG AGAGTAACAT GAACTnGTCA TTTGCCGCTC CTTCGAAAGC CAATTGCCCC AACTCGGGAG GCGACAACAA CCTTTCCCCT  CCCATGTCCT TTGACAATGG CTACTTCCGA AACTTGGTGA GCCAAAAGGG CTTACTCCAC TCGGACCAGC AATTGTTCAG TGnAGGTTCn ACGAATGCTC AAATGACTGC CTACAACAAG 
AACTTTGGCT CATTTCAGAA AGATTTTGCC AAGGCTGTGG TCAAnATGGG TAGCCTTAGC CCTCTCACCG ACTATCCCAG CTTAATTTTC GGAAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATCnnATCGA CCTCTACCTC GACACAATTG TCCGAGGAGA ACTACTACGC AGCAAAGTGC CCGAAGGCAC TTGAGACCGT GAGATCCAAC GTGAAGGCGG CGGTGGCCAA GGAGGCTCAC  ATGGGAGCAT CCTTGCTCCG ACTTCACTTT CACAACTACT TCGTCAATGG ATGTGATGCA TCCATTCTAC TAGACGATAC AACGAACTTC ATCGGnGAGA AGACAGCCCT TCCCAATGCA  AACTCTGTGA GAAGATTCnA CTTGATCGAC ACCATCAAGT TGGAAGTAGA GAAGTTATGC CCCGGTGTTG TCTTGTGCGC TGACATCTTA GCCATTGCTG CTAGGGACTC CGTTGTCGCA  TTGGGTGGAC CGAGTTGACA AGTTTAGCTC GGAAGAAGGG TTTnGACCAT GGCGAACGnA AGTGCTGCTA ATACCAACCT TCCATCTCCA AAGCTAAATC TCAGCGACCT CATCAnCGCT  TTCACCAACA AAGGGTTCAC TGCCCAAGAA ATGGTGGCAC TCTCAGGATC TCACACCATA GGCnAGGCTA GGTGCACnAC ATTCCGGGAC CAGCTCTACA ACGAGAGTAA CATGAACTnG  TCATTTGCCG CTCCTTCGAA AGCCAATTGC CCCAACTCGG GAGGCGACAA CAACCTTTCC CCTCCCATGT CCTTTGACAA TGGCTACTTC CGAAACTTGG TGAGCCAAAA GGGCTTACTC  CACTCGGACC AGCAATTGTT CAGTGnAGGT TCnACGAATG CTCAAATGAC TGCCTACAAC AAGAACTTTG GCTCATTTCA GAAAGATTTT GCCAAGGCTG TGGTCAAnAT GGGTAGCCTT 
AGCCCTCTCA CCGACTATCC CAGCTTAATT TTCGGAAAT 

Retrieve as FASTA