Entry information : EguPrx[P]174
Entry ID 11581
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EguPrx[P]174
Name EguPrx[P]174
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]174
start..stop
S start..stop
EgrPrx[P]174 557 0 1..281 1..281
EglPrx[P]174 476 8e-173 1..281 1..259
EgrPrx154 336 1e-116 1..281 18..315
EglPrx154 335 2e-116 1..281 18..315
Literature and cross-references EguPrx[P]174
Protein sequence: EguPrx[P]174
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   279
PWM (Da):   %s   29886.85  
PI (pH):   %s   6.03
Sequence
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Send to Peroxiscan
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GFYKSTCPQV EMIVRNAVHK AVSSNPGIEA GLIRLLFHDC FVRGRDASLL LNSSPGDKAE RDHPVSRSL* GFxVIDEAKA RLEAASPKxV SCVDILAFAT RESAYQLGGI SYAVPAGHHD  SLVFREDNML QNPPPPSFNA KPLVDIFASK GLSTDEMVTL SGVHSIGVSR CSVFSERLYA VDNATDAHDP PLDANDPLVA LDSTPTRLDN KYYQDLQNHR GILISDQTLY SSSAMADMVP 
DNAHDNRACS LKFPKAMVRM GSIEVLTGSQ GEV*RQCSSV N 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Frame shift and stop codon in exon 1, short 5' end is missing). Scaffold_11_38425 (52401..51361)
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGTTCTACA AATCGACATG TCCACAAGTG GAGATGATTG TGAGGAATGC TGTGCATAAG GCTGTCTCCA GCAACCCCGG CATTGAAGCC GGTCTCATTA GGTTGCTGTT CCATGATTGT  TTTGTCAGGG TAATGTGATA GATAATCCCT TAATGTCAAG CCAAGTATAT ACGCGCATGT GCATGGAAAA ATATTGCTTA GACTCAGTTC TATCCATGAG CGTCACGGTG CTGGAGACTG  ATAAATAGTA ACCAAGTTAA ACTGTGATCG CAGGGCCGTG ATGCTTCTCT GCTCCTAAAT TCCAGCCCAG GAGATAAGGC AGAACGAGAC CATCCTGTTA GCCGCAGCTT ATGAGGATTC  GAnGTAATTG ATGAAGCAAA AGCCCGGTTG GAAGCCGCGT CCCCAAAACA nGTATCATGT GTGGACATCC TCGCCTTTGC CACTCGCGAA AGCGCATACC AGCTAGGAGG AATTAGCTAC  GCAGTCCCCG CTGGCCACCA CGACAGCCTC GTCTTTCGCG AAGACAACAT GTTACAGAAC CCGCCGCCCC CTTCCTTCAA TGCCAAGCCG CTGGTGGACA TTTTCGCTAG CAAAGGGCTG  TCTACGGACG AGATGGTGAC GCTCTCAGGA GTGCACTCGA TTGGCGTCTC GCGTTGCTCC GTCTTCTCAG AACGCCTCTA CGCTGTTGAC AACGCAACCG ATGCCCATGA TCCACCATTG  GATGCCAAGT ACATGGCTTT CCTCGGGACC ATTTGCCCGA GGCCACAGAG CAGAAACAGC GCAGCGATCC ACTGGTGGCA CTAGACTCAA CGCCGACTCG CTTGGACAAC AAGTATTATC  AGGATCTGCA GAATCACCGT GGCATATTGA TTTCGGACCA GACCTTGTAC TCGAGCTCTG CAATGGCCGA CATGGTCCCC GACAATGCTC ACGACAATAG AGCCTGCAGT CTCAAGTTCC 
CAAAGGCCAT GGTGCGGATG GGCTCCATTG AGGTCCTCAC AGGCTCACAA GGTGAGGTTT GAAGACAGTG CAGCTCCGTG AAT 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGGTTCTACA AATCGACATG TCCACAAGTG GAGATGATTG TGAGGAATGC TGTGCATAAG GCTGTCTCCA GCAACCCCGG CATTGAAGCC GGTCTCATTA GGTTGCTGTT CCATGATTGT  TTTGTCAGGG GCCGTGATGC TTCTCTGCTC CTAAATTCCA GCCCAGGAGA TAAGGCAGAA CGAGACCATC CTGTTAGCCG CAGCTTATGA GGATTCGAnG TAATTGATGA AGCAAAAGCC  CGGTTGGAAG CCGCGTCCCC AAAACAnGTA TCATGTGTGG ACATCCTCGC CTTTGCCACT CGCGAAAGCG CATACCAGCT AGGAGGAATT AGCTACGCAG TCCCCGCTGG CCACCACGAC  AGCCTCGTCT TTCGCGAAGA CAACATGTTA CAGAACCCGC CGCCCCCTTC CTTCAATGCC AAGCCGCTGG TGGACATTTT CGCTAGCAAA GGGCTGTCTA CGGACGAGAT GGTGACGCTC  TCAGGAGTGC ACTCGATTGG CGTCTCGCGT TGCTCCGTCT TCTCAGAACG CCTCTACGCT GTTGACAACG CAACCGATGC CCATGATCCA CCATTGGATG CCAACGATCC ACTGGTGGCA  CTAGACTCAA CGCCGACTCG CTTGGACAAC AAGTATTATC AGGATCTGCA GAATCACCGT GGCATATTGA TTTCGGACCA GACCTTGTAC TCGAGCTCTG CAATGGCCGA CATGGTCCCC  GACAATGCTC ACGACAATAG AGCCTGCAGT CTCAAGTTCC CAAAGGCCAT GGTGCGGATG GGCTCCATTG AGGTCCTCAC AGGCTCACAA GGTGAGGTTT GAAGACAGTG CAGCTCCGTG 
AAT 

Retrieve as FASTA