Entry information : EguPrx[P]184
Entry ID 11585
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EguPrx[P]184
Name EguPrx[P]184
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]184
start..stop
S start..stop
EcamPrx[P]184 165 3e-55 1..95 2..96
EgrPrx45 107 4e-30 16..94 243..321
EglPrx45 107 4e-30 16..94 243..321
EguPrx171-2 106 7e-30 16..94 243..321
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1374..1658 285  
join(1374..1658)


exon

Literature and cross-references EguPrx[P]184
Protein sequence: EguPrx[P]184
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   92
PWM (Da):   %s   9518.59  
PI (pH):   %s   7.91
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

FAD*P*SEAS CSSGxPSLNM TDTSYYQGTP TNRCLFTCDx TLLTNSAIAN QxSQNARNPF I*KNNSAATM VKMGKIVDLT GSIEEIRVKC RVING 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Stop in frame; 5' end is missing).
scaffold_1_1488 (1374..1658)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTGCAGACT AACCCTAATC TGAAGCTAGT TGTTCCAGTG GAAnnCCTAG CCTGAACATG ACGGATACAA GTTATTATCA GGGCACACCT ACAAATCGAT GCTTGTTCAC ATGTGACCnn  ACACTCCTCA CAAACTCTGC AATTGCAAAC CAAnnnAGTC AAAATGCAAG AAATCCATTC ATTTGAAAAA ACAATTCTGC TGCTACAATG GTGAAGATGG GTAAAATTGT TGACTTGACT 
GGAAGTATTG AGGAGATTCG AGTAAAGTGC AGGGTCATTA ATGGC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTGCAGACT AACCCTAATC TGAAGCTAGT TGTTCCAGTG GAAnnCCTAG CCTGAACATG ACGGATACAA GTTATTATCA GGGCACACCT ACAAATCGAT GCTTGTTCAC ATGTGACCnn  ACACTCCTCA CAAACTCTGC AATTGCAAAC CAAnnnAGTC AAAATGCAAG AAATCCATTC ATTTGAAAAA ACAATTCTGC TGCTACAATG GTGAAGATGG GTAAAATTGT TGACTTGACT 
GGAAGTATTG AGGAGATTCG AGTAAAGTGC AGGGTCATTA ATGGC 

Retrieve as FASTA