Entry information : EguPrx[P]186
Entry ID 11586
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EguPrx[P]186
Name EguPrx[P]186
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]186
start..stop
S start..stop
EgrPrx[P]186 307 3e-109 5..175 1..171
EcamPrx[P]186 290 2e-102 1..175 1..175
EglPrx[P]186 137 4e-43 97..169 1..73
EcamPrx[P]171 132 3e-40 32..175 36..180
Literature and cross-references EguPrx[P]186
Protein sequence: EguPrx[P]186
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   168
PWM (Da):   %s   18251.79  
PI (pH):   %s   11.94
Sequence
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Send to Peroxiscan
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S*PGRRD*P* xA*xPPISTS xLQFLISTTx xPLSPTRIHC QRNGGTLGIP HHRQGQAHYI PIPARQLKQH KLIVHHIFKG *LP*LRRRQK PLPS*SHEPC ILRQxLLAQL GEPKGLLHLD 
QRLFSGDLMD HQVTVYLNNL DLFWSNxANA MVRMGGLSHL TRFSDHIRMN RRKVN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (5' end is missing; stops in frame). Scaffold_11_36687 (6576..6053)
DNA
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TCATGACCAG GAAGAAGAGA TTGACCATGA nGAGCCTAAG nGCCGCCAAT ATCGACCTCC nATCTCCAAT TCTTGATCTC AACTACCnCA TnACCTCTTT CTCCAACAAG GATTCATTGC  CAAAGAAATG GTGGCACTCT TGGTATCCCA CACCATAGGC AAGGCCAGGC ACACTACATT CCGATCCCGG CTCGACAACT AAAGCAACAT AAACTCATCG TTCATCACAT CTTTAAAGGC  TGATTGCCTT AGCTCAGGAG GCGACAAAAA CCTCTCCCAT CCTGAAGTCA TGAGCCTTGC ATCCTTCGAC AAnAGCTACT TGCGCAACTT GGTGAGCCAA AAGGCCTACT CCACTTAGAC  CAACGTCTGT TTAGTGGGGA TTTGATGGAC CATCAAGTGA CCGTATACCT CAACAATTTG GATTTGTTCT GGAGCAACTT nGCTAATGCA ATGGTTAGGA TGGGAGGCCT TAGCCATCTT 
ACCAGGTTTA GTGATCATAT AAGGATGAAT CGTAGGAAGG TCAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCATGACCAG GAAGAAGAGA TTGACCATGA nGAGCCTAAG nGCCGCCAAT ATCGACCTCC nATCTCCAAT TCTTGATCTC AACTACCnCA TnACCTCTTT CTCCAACAAG GATTCATTGC  CAAAGAAATG GTGGCACTCT TGGTATCCCA CACCATAGGC AAGGCCAGGC ACACTACATT CCGATCCCGG CTCGACAACT AAAGCAACAT AAACTCATCG TTCATCACAT CTTTAAAGGC  TGATTGCCTT AGCTCAGGAG GCGACAAAAA CCTCTCCCAT CCTGAAGTCA TGAGCCTTGC ATCCTTCGAC AAnAGCTACT TGCGCAACTT GGTGAGCCAA AAGGCCTACT CCACTTAGAC  CAACGTCTGT TTAGTGGGGA TTTGATGGAC CATCAAGTGA CCGTATACCT CAACAATTTG GATTTGTTCT GGAGCAACTT nGCTAATGCA ATGGTTAGGA TGGGAGGCCT TAGCCATCTT 
ACCAGGTTTA GTGATCATAT AAGGATGAAT CGTAGGAAGG TCAAT 

Retrieve as FASTA