Entry information : EguPrx[P]197
Entry ID 11591
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2012-12-17 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EguPrx[P]197
Name EguPrx[P]197
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]197
start..stop
S start..stop
EcamPrx[P]197 137 1e-43 1..72 109..180
EgrPrx[P]197 134 7e-42 1..72 134..205
EgrPrx191 85 4e-22 1..72 210..281
EcamPrx191 85 5e-22 1..72 210..281
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 25275..25490 216  
join(25275..25490)


exon

Literature and cross-references EguPrx[P]197
Protein sequence: EguPrx[P]197
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   69
PWM (Da):   %s   7405.63  
PI (pH):   %s   6.8
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

KTKNDTRWAT TQKTHYLASE xETNLxPLN* TPNRFDNDY* QNLMARHGLL HSxLELFNGG S*DVLVGTYS NN 

Retrieve as FASTA  
Remarks Pseudogene from genomic. (Two ends are missing; stops in frame; Short PS). Scaffold_11_36606 (25275..25490)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAGACCAAAA ACGACACTCG TTGGGCTACC ACCCAGAAGA CTCACTACCT TGCCTCTGAA AnGGAAACCA ACCTTnCACC CCTCAACTAG ACCCCAAACC GGTTTGACAA CGACTACTAG 
CAGAACCTCA TGGCGCGGCA TGGGCTCCTC CATTCGGnCC TAGAGTTGTT CAACGGAGGA TCGTAGGACG TGCTCGTTGG GACTTATAGC AATAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAGACCAAAA ACGACACTCG TTGGGCTACC ACCCAGAAGA CTCACTACCT TGCCTCTGAA AnGGAAACCA ACCTTnCACC CCTCAACTAG ACCCCAAACC GGTTTGACAA CGACTACTAG 
CAGAACCTCA TGGCGCGGCA TGGGCTCCTC CATTCGGnCC TAGAGTTGTT CAACGGAGGA TCGTAGGACG TGCTCGTTGG GACTTATAGC AATAAT 

Retrieve as FASTA