Entry information : EguPrx[P]30
Entry ID 11593
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2012-12-17 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-21 (Christophe Dunand)
Peroxidase information: EguPrx[P]30
Name EguPrx[P]30
Class Class III peroxidase     [Orthogroup: Prx012]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]30
start..stop
S start..stop
EgrPrx[P]30 486 2e-176 1..250 76..325
EglPrx[P]30 483 3e-175 1..250 76..323
EgrPrx[P]27 410 2e-146 2..250 72..320
EguPrx[P]27 404 7e-144 3..250 73..320
Literature and cross-references EguPrx[P]30
Protein sequence: EguPrx[P]30
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   249
PWM (Da):   %s   26635.35  
PI (pH):   %s   6.51
Sequence
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Send to Peroxiscan
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ECDASILLDS TPSFASEKFA IPNNNSxRxF EVIDRIKAAV DEACGGPVVS CADSLAVAA* DCRSxxGGPW WKVRLRRKDS TVASxDKAQA xLPSPFSNIS NITKSFINQS LDINNLVVLS  GAHTPGYARC TIFRERIYSD TNIEPTFAQS LRSFCPPLPS NESDPRLAAL DQTSAVFDTL YYKNLLQQEG LLHSDQALLN NPLAAELVKS YSEEGERFQR DSTKSMVKMI NIKPSTGERG 
QVQRDCRRAN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Stop codons in frame, and missing 5' end). Scaffold_1_748 (641..1500)
DNA
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GAATGCGACG CTTCAATTCT TTTGGACTCT ACGCCTTCCT TTGCCAGCGA GAAGTTTGCC ATTCCTAATA ACAATTCAnT TAGAnGATTC GAAGTAATCG ACCGGATCAA GGCAGCAGTT  GATGAAGCTT GTGGAGGCCC TGTGGTCTCC TGTGCAGACA GCTTGGCCGT TGCTGCCTGA GACTGTCGTA GTnnnnnnGG TACGTATTAA TTACTCGCAT TATCATCCAG TTTCTAAAGG  ATGGCCTAAA TACTACAGAT GAACAAGAGA CATCAAATAT GTTGGAAAAA TTTGTTAATA TTCCAATGCG GCCAGGAGGA CCATGGTGGA AGGTTCGACT CAGAAGAAAA GACTCAACCG  TGGCAAGCAn GGACAAGGCT CAAGCGTnTC TTCCTTCGCC TTTTAGCAAT ATCTCTAACA TAACCAAGTC CTTCATAAAT CAAAGCCTCG ACATTAATAA CTTGGTCGTC CTGTCCGGTG  CACACACACC AGGATATGCA CGGTGCACAA TATTCAGGGA AAGGATCTAC AGTGACACAA ACATTGAGCC AACCTTCGCA CAAAGCCTTC GGTCGTTTTG CCCGCCCCTT CCAAGCAACG  AATCCGACCC TAGGCTCGCT GCTTTGGATC AAACTTCTGC TGTCTTTGAT ACTTTGTACT ATAAAAACTT GTTACAGCAA GAAGGGCTTC TCCATTCCGA TCAGGCGCTT CTCAACAATC  CCCTAGCTGC CGAGCTGGTC AAGTCTTACA GCGAAGAAGG CGAGAGGTTT CAGAGAGATT CCACGAAATC CATGGTTAAG ATGATAAATA TAAAGCCTTC GACTGGTGAA CGTGGCCAAG 
TTCAACGCGA CTGTAGACGA GCGAAC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAATGCGACG CTTCAATTCT TTTGGACTCT ACGCCTTCCT TTGCCAGCGA GAAGTTTGCC ATTCCTAATA ACAATTCAnT TAGAnGATTC GAAGTAATCG ACCGGATCAA GGCAGCAGTT  GATGAAGCTT GTGGAGGCCC TGTGGTCTCC TGTGCAGACA GCTTGGCCGT TGCTGCCTGA GACTGTCGTA GTnnnnnnGG TGGACCATGG TGGAAGGTTC GACTCAGAAG AAAAGACTCA  ACCGTGGCAA GCAnGGACAA GGCTCAAGCG TnTCTTCCTT CGCCTTTTAG CAATATCTCT AACATAACCA AGTCCTTCAT AAATCAAAGC CTCGACATTA ATAACTTGGT CGTCCTGTCC  GGTGCACACA CACCAGGATA TGCACGGTGC ACAATATTCA GGGAAAGGAT CTACAGTGAC ACAAACATTG AGCCAACCTT CGCACAAAGC CTTCGGTCGT TTTGCCCGCC CCTTCCAAGC  AACGAATCCG ACCCTAGGCT CGCTGCTTTG GATCAAACTT CTGCTGTCTT TGATACTTTG TACTATAAAA ACTTGTTACA GCAAGAAGGG CTTCTCCATT CCGATCAGGC GCTTCTCAAC  AATCCCCTAG CTGCCGAGCT GGTCAAGTCT TACAGCGAAG AAGGCGAGAG GTTTCAGAGA GATTCCACGA AATCCATGGT TAAGATGATA AATATAAAGC CTTCGACTGG TGAACGTGGC 
CAAGTTCAAC GCGACTGTAG ACGAGCGAAC 

Retrieve as FASTA