Entry information : EguPrx[P]57
Entry ID 11600
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EguPrx[P]57
Name EguPrx[P]57
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]57
start..stop
S start..stop
EgrPrx[P]57 387 7e-140 1..205 1..205
EcamPrx[P]57 254 8e-88 1..153 1..164
EglPrx[P]57 249 4e-86 1..205 1..150
EcamPrx176 197 3e-63 66..205 186..325
EcamPrx176 97 1e-24 3..75 63..132
Literature and cross-references EguPrx[P]57
Protein sequence: EguPrx[P]57
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   202 (173)
PWM (Da):   %s   22095.09 (18710.2)  
PI (pH):   %s   6.78 (5.60) Peptide Signal:   %s   cut: 30 range:30-202
Sequence
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Send to Peroxiscan
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MSRLH*ERTF IRRIISLLHS ILLDLTANN* AEKAAVPNQS LTGFDVIDKI KEKLEETCPL VVYCVDILIL AARDSSGGHT IGVGHCNFFS NRLYNFTGKG DQDLSLDQDL SLDPTYASQL 
KAQRKTHSNN VTAVAMDPGS PLSFNSHFYT ALNPN*GLFQ SDTMLLxxDQ DGFFTEFRQS MKQMGAAQVL MGSYGEIRKK CNVIN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Stops in frame, Gaps in frame). Scaffold_2_3947 (6144..3796)
DNA
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ATGTCTAGAT TGCACTGAGA ACGCACATTC ATTAGAAGAA TCATTTCATT GCTCCATATC ATTGCCACAT GGTTGTAGAA AGAGAGTTTC GCATGGTAAT GTTCCATCGG TGTTTGATCG  GATCGCTTCA TGTGTGTAGG GTTGCAAGCT CGATTTTGCT AGATTTGACG GCAAACAACT AGGCGGAGAA GGCGGCAGTT CCGAACCAGT CGCTAACTGG GTTTGATGTA ATAGACAAGA  TCAAGGAGAA GCTAGAGGAA ACATGCCCCC TCGTCGTCTA TTGTGTTGAC ATCCTCATTT TAGCTGCTCG AGACTCnGGT CTCTATCCAA GTAAGACTTT TCGAGGCGAT GAAAACTCTT  GGACCATTCA TTGGCATCCT TTTGAGTGTG TTTCAACACT TTTGAAGGCT TTTCTTCTTG AGTTAGTAGA ACTTTAGTAA CCTTGTCGAC ACTCCTCGAC ATGTGCTCTT GAACAAAACT  ATTGTGGAAA AAGGCTTTTT TGGAGCATTC CATGGCGACA CTAGACTATC AAGCAAAAAT TTATCTTTCT TCTTTGATAC TATTTTCGAC CACACAAATA CGTCAAAGTC AACCGTATTT  TGATTCATGA TCAATCCATA GACAATAACA ATTATATAGG CATCATAATT TATCGGGAAA AAnnnnnnnn nnnnAAAAAA ATCATAAATC TATTGCATTG AAACAAATTT AATTATAAAC  TTTTTAATTG AACCAATTTA ATCTTAAACA TTTCTACATT AGTACCAATT CAGTCCATCT AACTAATTTA GCCCGGATAA ATAATTAGAC AAATGCAAAA ACAACATCAT TTTGCTGATG  ATGTGGATAT ATAATTAATA TAAAACTTAA TTAATTTAAA TTTAATATGA AATTAAAAAG GGGAGGAAGA AGATGAACGG TTGAAGGTGG CTGAGAGCTC AACCCTTGCC ACCAATGCCT  ACATGAGATC GCTAGGAAGG GCAGGGCCAA CCCTTCCCCA ACCGTCGCCG GCCCTTCCCG ATGACGGCGG GGAGTCGGTG GTGATGTGGG CGGAGCCCTC AACTGCCTCC AACTGTTCAT  CTTCTTGCTT CCTCTCTTTT TTTTAAAAAA nnAGTCGTTT TATATTTAAT TTAATGAAAT TTTATATTAA AATTCAAATC CATGCCAAAA TGACGTTGTT TTTGCATTTC TTTGCTAAGT  CAGCTTTCTA GTGAGTCACA CAAGTGAGCA AGATTAATAA AAATTACCAC GTAAGATTTT CTGCGAGGTT CATTGGAGGT GATATTTAAG TGTCACTTTC CACCTTACCA AAAAAATTCC  ACCTTACCAA AAAAAAAAnG TGTCAATTTC CTAACTTTTG GTACTTAAAT GTCCATTTAT GCCAAGTTTT AGGATTTGGG CCGTACTTTT GCTCACAATA ATTGTATTAG GTTGTCTCAC  TCAAAAATAT ATAATGGAAT ATCTTTTTTn TTTTTTTTCC AAACAAACCA CAGTATAGCA TTGAAGTCCG TGGTGAAATT ATCCGCATTC TTTTTTATCT GGTGTAACGG AGTGTAATTA  CAAAGAATTC TTTTATTTAG TTACTTCACA AATAAGTTAC TATCCTAATG ATnCGAnCAT TGTCAACTAA TAACGGTGTA AGTCGGATCC CACTTTTTAT ATTATATAGG ACGGGCAACC  AGAGCACAGT ATTCGTAATT TCAATATTTC CTATTTATAT AGATTTTGGT TTCCCAATGA GAGAnACATA GCATGTTGAC ATTACAAGTG AAAAAnAAAA AnAACACTCC ATCAAAAACA  CCCAAGCTTT CTCGATTTGA ACAAGACACA GACTTGGACA TTCACTTGCC ATTACACGAG GACAAACTAA CGACTAATCA AAATAAGAAG AGCAGTTGAA TTAATTAGTT AATTAATTAA  GTATAAAATA CATTTCTGGG TCATCAGGTG GGCACACAAT TGGGGTCGGG CACTGCAACT TCTTCAGCAA CCGGCTCTAC AACTTTACTG GCAAAGGCGA CCAAGACCTT TCCCTCGACC  AAGACCTTTC CCTCGACCCG ACCTACGCCT CTCAATTGAA GGCCCAGCGC AAGACGCACT CCAATAACGT CACCGCCGTC GCGATGGACC CCGGAAGCCC CCTCTCCTTC AACAGCCACT  TCTACACAGC CTTGAACCCA AACTAGGGCC TCTTCCAATC CGACACCATG CTTCTGAGCG ACAATCGACA AGTTGCTGnn nnnnGACCAG GATGGCTTCT TCACCGAGTT CAGGCAGTCG 
ATGAAGCAGA TGGGCGCAGC CCAGGTGCTT ATGGGGAGCT ATGGCGAGAT CCGGAAGAAA TGTAATGTGA TTAAC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCTAGAT TGCACTGAGA ACGCACATTC ATTAGAAGAA TCATTTCATT GCTCCACTCG ATTTTGCTAG ATTTGACGGC AAACAACTAG GCGGAGAAGG CGGCAGTTCC GAACCAGTCG  CTAACTGGGT TTGATGTAAT AGACAAGATC AAGGAGAAGC TAGAGGAAAC ATGCCCCCTC GTCGTCTATT GTGTTGACAT CCTCATTTTA GCTGCTCGAG ACTCATCAGG TGGGCACACA  ATTGGGGTCG GGCACTGCAA CTTCTTCAGC AACCGGCTCT ACAACTTTAC TGGCAAAGGC GACCAAGACC TTTCCCTCGA CCAAGACCTT TCCCTCGACC CGACCTACGC CTCTCAATTG  AAGGCCCAGC GCAAGACGCA CTCCAATAAC GTCACCGCCG TCGCGATGGA CCCCGGAAGC CCCCTCTCCT TCAACAGCCA CTTCTACACA GCCTTGAACC CAAACTAGGG CCTCTTCCAA  TCCGACACCA TGTTGCTGnn nnnnGACCAG GATGGCTTCT TCACCGAGTT CAGGCAGTCG ATGAAGCAGA TGGGCGCAGC CCAGGTGCTT ATGGGGAGCT ATGGCGAGAT CCGGAAGAAA 
TGTAATGTGA TTAAC 

Retrieve as FASTA