Entry information : GprAPx-CcP01
Entry ID 11620
Creation 2013-01-11 (Marcel Zamocky)
Last sequence changes 2013-04-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-04-24 (Christophe Dunand)
Peroxidase information: GprAPx-CcP01
Name GprAPx-CcP01
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Fungi/Metazoa; Fungi; Chytridiomycota; Chytridiomycota
Organism Gonapodya prolifera    [TaxId: 1123529 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GprAPx-CcP01
start..stop
S start..stop
GprAPx-CcP02 464 1e-162 9..469 28..385
CuniAPx-CcP02 339 7e-112 27..469 19..448
BfuAPx-CcP02 336 2e-110 18..468 5..446
MbruAPx-CcP1 332 4e-109 9..449 4..432
Literature and cross-references GprAPx-CcP01
DNA ref. JGI genome:   scaffold 72 (131243..132797)
Cluster/Prediction ref. JGI gene:   72910 [Incorrect prediction]
Protein sequence: GprAPx-CcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   473 (444)
PWM (Da):   %s   49516.65 (46505.0) Transmb domain:   %s   i13-35o
PI (pH):   %s   5.21 (4.94) Peptide Signal:   %s   cut: 30 range:30-473
Sequence
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Send to Peroxiscan
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MRVFRPSWTA ASLAIAVSSI TTTLAPVLAA GPIWPSPHDA IETHFYQMTG LFRTGIIDGV SPCAFSSSGN GRVAAAEWVR TAFHDMATHD VQAGTGGLDG SLLFEMERGE NGGDAFNATF  KFFRNFYSYK SSLADVIALG FVTSIGSCGG GSLPLRVGRV DATVAGPEGV PKPDDPLDVM TQKFARAGFT EPAHFITLVA CGHTLGGVHG EDFPTLVPPS AGIPNNFSHF DTTAAVFDSR  VVTEYVNGTT SSPLVVGPDP SLRSDLRLFS SDKNATVTSL GALSAEDFKA KCAAVFSKML DTVPAGVQLS EPLQPYELRP IKPLFGVFNS THLAFSTNLR IRQKGRGTIA AVTARFAGLN 
GTCPSIESGG CEVEATPQRF AGGVGTGGSP MEVFEYWTAS VTYSANISIT SFLTTLTFAD NTTEVLNNGG LGYPISDAVI VDNTLSCIKP VNASNTSGEW LVTVFASVSC SSF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (2 introns). Incorrect prediction from JGI (fusion of two tandem APx-CCP).
DNA
Send to BLAST
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ATGCGCGTAT TCCGGCCTTC GTGGACTGCC GCCTCACTGG CGATTGCGGT GTCGTCGATC ACGACCACTC TAGCACCCGT TCTCGCCGCT GGTCCAATAT GGCCATCGCC TCACGACGCG  ATCGAAACCC ACTTCTACCA GATGACGGGC CTTTTCCGCA CCGGTATCAT CGACGGCGTC TCTCCGTGCG CCTTCAGCTC CTCGGGAAAC GGCCGCGTCG CAGCCGCTGA ATGGGTTCGC  ACCGCGTTCC ACGATATGGC GACTCACGAC GTGCAGGCGG GCACGGGGGG GCTCGATGGA TCCCTTCTCT TCGAGATGGA AAGGGGCGAA AATGGGGGGG ACGCTTTCAA CGCGACTTTC  AAGTTCTTCC GCAACTTCTA CTCCTACAAA TCTTCTCTCG CCGACGTCAT CGCTTTGGGT TTTGTCACTT CAATTGGCTC TTGTGGGGGA GGTTCTCTCC CTCTCCGGGT TGGCCGCGTG  GACGCCACTG TGGCAGGGCC AGAAGGAGTT CCGAAGCCAG ACGATCCTCT GGACGTGATG ACCCAGAAGT TTGCTCGAGC AGGATTTACG GAACCGGCGC ACTTTATCAC CTTGGTCGCC  TGTGGGCACA CCCTCGGCGG CGTCCACGGC GAAGACTTTC CGACACTCGT TCCACCCTCT GCCGGGATCC CGAATAACTT TTCACACTTC GACACGACTG CTGCTGTCTT TGACAGTCGC  GTGGTAACCG AGTATGTGAA CGGGACAACT TCAAGCCCAC TGGTTGTTGG ACCGGACCCT TCATTGCGAT CCGACCTTCG ACTGTTCTCG TCTGACAAGA ACGCAACCGT GACCTCCCTC  GGGGCACTTT CGGCGGAAGA TTTCAAGGCG AAGTGCGCCG CAGTGTTTTC GAAGATGCTT GACACCGTTC CAGCAGGGGT GCAGTGCGTG ATTGTTGCTC GTCTTCCTGA TCTACTATGT  GTCCAAACTC ACACGAATTC ATTACAGACT TTCTGAGCCT CTCCAGCCGT ACGAGCTCCG CCCCATAAAG CCGCTCTTCG GCGTCTTCAA CTCCACTCAC CTTGCCTTCT CCACGAACTT  GAGGATTCGC CAAAAGGGAC GCGGTACAAT CGCAGCAGTG ACAGCTCGTT TCGCTGGCTT AAATGGAACG TGCCCCAGTA TCGAATCCGG AGGATGTGAG GTGGAGGCCA CGCCGCAAAG  GTTTGCCGGT GGTGTCGGCA CAGGTGGATC ACCAATGGAA GTATTTGAGG TGAGTGTACT TGGTGTGCAA TATGCGACGC AACGTCACCT GACCTCACAC AAACTCTGCT CAAATCAGTA  CTGGACTGCA TCTGTCACCT ATAGCGCCAA TATTTCGATC ACTTCGTTCC TGACCACCTT GACTTTCGCC GATAACACGA CTGAAGTACT CAACAATGGG GGATTAGGAT ATCCTATTAG 
CGATGCAGTT ATTGTGGACA ACACGCTGAG CTGCATAAAA CCAGTCAACG CATCGAACAC GAGTGGGGAA TGGCTCGTGA CAGTTTTTGC TTCTGTGAGT TGCTCCTCAT TTTGA 

Retrieve as FASTA