Entry information : GbPrx02(Ginbil_Gb_37294)
Entry ID 1163
Creation 2007-03-22 (Christophe Dunand)
Last sequence changes 2015-02-13 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx02(Ginbil_Gb_37294)
Name GbPrx02(Ginbil_Gb_37294)
Class Class III peroxidase    [Orthogroup: Prx066]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx02
start..stop
S start..stop
GbPrx67 740 0 1..370 1..370
GbPrx68 730 0 1..370 1..370
GbPrx50 557 0 1..370 1..362
GbPrx64 527 0 1..355 1..351
Literature and cross-references GbPrx02(Ginbil_Gb_37294)
Literature REFEREENCE 1 Brenner,E.D. et al Expressed tag sequences from Gingko megasporophyll (NYBG) Unpublished (2003).

REFERENCE 2 Hua,C., Linling,L., Yan,W., Feng,X., Jie,C. and Shuiyuan,C. Molecular cloning, characterization and expression of a peroxidases gene from Ginkgo biloba.
mRNA ref. GenBank:   FJ599670.1
EST ref. GenBank:   DR064298.1 [3' end]
Protein sequence: GbPrx02(Ginbil_Gb_37294)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   370
PWM (Da):   %s   40298.29 Transmb domain:   %s   i5-27o
PI (pH):   %s   5.76
Sequence
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Send to Peroxiscan
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MDKSSITVLC IYACAWVFIS ANGFSVIYED ADALPKPVDG LSWSFYKESC PKLESIVKKR INVYLKQDIT QAAGLLRLHF HDCFVQGCDA SVLLDGSTSG PGEQEAPPNL TLREKAFKII  DDIKNAVEAT CSGVVSCADI LALAARDSVK KAGGPKYRVP LGRRDGLNFA NLSTTLANLP PPSSNVTGLM SVLGPKGFNL TDLVALSGGH TIGIGHCTSF DNRIYNTSTG TRQRDPTLDQ  SFAKKLYSVC PVVNNAINST DLDIRSPNVF DNKYYVDLLN RQTLFTSDQS LYTDARTRDI VKSFALDQTV FFENFVLGML KMGQLNVLTG SQGEIRSNCS VRNPSSSYYY DDEVVIEPLV 
RAEESSSQSM 

Retrieve as FASTA  
Remarks Complete sequence from genomic and RNA seq (gba_locus_21892_iso_1_len_1297_ver_2). No EST found.
CDS
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ATGGACAAGT CTAGTATTAC TGTTTTGTGT ATATATGCGT GTGCGTGGGT ATTCATCTCC GCTAACGGGT TTTCAGTAAT TTACGAGGAT GCAGACGCTC TTCCAAAGCC AGTGGACGGC  CTCTCGTGGT CTTTTTATAA GGAGAGTTGC CCAAAGTTGG AGTCCATAGT GAAGAAGCGT ATCAACGTTT ACTTAAAACA AGATATCACG CAAGCGGCAG GCCTGCTGAG GCTCCATTTT  CACGACTGTT TTGTGCAGGG CTGCGATGCA TCGGTATTGC TTGACGGATC GACAAGCGGA CCTGGTGAGC AAGAAGCTCC TCCAAACTTG ACACTCCGAG AAAAGGCATT CAAGATTATC  GATGATATCA AAAACGCAGT GGAAGCCACT TGCAGTGGCG TTGTGTCGTG TGCTGACATT TTGGCTTTAG CAGCTCGAGA TTCCGTTAAA AAGGCCGGAG GGCCCAAATA TCGCGTACCG  CTCGGCCGCA GAGACGGGCT TAACTTTGCG AATCTGTCAA CTACTCTTGC GAATTTGCCT CCGCCGTCTT CAAATGTGAC GGGGCTCATG AGTGTTTTAG GCCCCAAAGG CTTTAATTTG  ACGGATCTGG TGGCACTTTC AGGTGGACAC ACGATTGGCA TCGGCCACTG CACCTCCTTC GACAACAGAA TCTACAATAC CTCCACTGGA ACACGCCAGC GGGATCCCAC TCTTGACCAG  AGTTTTGCAA AGAAGCTTTA TTCCGTCTGC CCGGTGGTAA ATAACGCCAT CAACAGCACC GACTTGGACA TCCGTAGCCC AAACGTGTTC GACAACAAGT ATTATGTGGA TCTATTGAAC  AGGCAAACGC TCTTCACCTC TGACCAGAGT CTCTACACAG ACGCTCGCAC TCGAGACATT GTTAAAAGCT TTGCATTGGA CCAGACGGTG TTCTTCGAAA ACTTCGTGCT GGGGATGCTT  AAGATGGGCC AACTGAATGT CCTGACGGGT AGTCAAGGAG AGATCCGAAG CAACTGCTCT GTTCGCAATC CATCATCGTC TTATTATTAT GATGATGAAG TAGTTATTGA ACCCCTCGTG 
CGTGCGGAGG AATCGTCGTC GCAGTCTATG TGA 

Retrieve as FASTA  
cDNA
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AAGCAGAAAT TGCCGTTCTA ACCAAGCAAC GTCCATCGGG AACTTTGATT GATCTGCAAC AACAATGGAC AAGTCTAGTA TTACTGTTTT GTGTATATAT GCGTGTGCGT GGGTATTCAT  CTCCGCTAAC GGGTTTTCAG TAATTTACGA GGATGCAGAC GCTCTTCCAA AGCCAGTGGA CGGCCTCTCG TGGTCTTTTT ATAAGGAGAG TTGCCCAAAG TTGGAGTCCA TAGTGAAGAA  GCGTATCAAC GTTTACTTAA AACAAGATAT CACGCAAGCG GCAGGCCTGC TGAGGCTCCA TTTTCACGAC TGTTTTGTGC AGGGCTGCGA TGCATCGGTA TTGCTTGACG GATCGACAAG  CGGACCTGGT GAGCAAGAAG CTCCTCCAAA CTTGACACTC CGAGAAAAGG CATTCAAGAT TATCGATGAT ATCAAAAACG CAGTGGAAGC CACTTGCAGT GGCGTTGTGT CGTGTGCTGA  CATTTTGGCT TTAGCAGCTC GAGATTCCGT TAAAAAGGCC GGAGGGCCCA AATATCGCGT ACCGCTCGGC CGCAGAGACG GGCTTAACTT TGCGAATCTG TCAACTACTC TTGCGAATTT  GCCTCCGCCG TCTTCAAATG TGACGGGGCT CATGAGTGTT TTAGGCCCCA AAGGCTTTAA TTTGACGGAT CTGGTGGCAC TTTCAGGTGG ACACACGATT GGCATCGGCC ACTGCACCTC  CTTCGACAAC AGAATCTACA ATACCTCCAC TGGAACACGC CAGCGGGATC CCACTCTTGA CCAGAGTTTT GCAAAGAAGC TTTATTCCGT CTGCCCGGTG GTAAATAACG CCATCAACAG  CACCGACTTG GACATCCGTA GCCCAAACGT GTTCGACAAC AAGTATTATG TGGATCTATT GAACAGGCAA ACGCTCTTCA CCTCTGACCA GAGTCTCTAC ACAGACGCTC GCACTCGAGA  CATTGTTAAA AGCTTTGCAT TGGACCAGAC GGTGTTCTTC GAAAACTTCG TGCTGGGGAT GCTTAAGATG GGCCAACTGA ATGTCCTGAC GGGTAGTCAA GGAGAGATCC GAAGCAACTG  CTCTGTTCGC AATCCATCAT CGTCTTATTA TTATGATGAT GAAGTAGTTA TTGAACCCCT CGTGCGTGCG GAGGAATCGT CGTCGCAGTC TATGTGAAAT TAAGATATCA AACTCCTGTA 
ATACTCTTGC ACTGTTTCCG TTCAAGTTTT CTTTTCCCCT TCTTTTTTTT TCCACCATAA ATAAAAAAAG CAAATTGCAA TCTTTTCACA AAAAAAA 

Retrieve as FASTA