Entry information : AeuPGHS02_201684 ( g17755.t1 / Ae201684_17755.1)
Entry ID 11643
Creation 2013-02-13 (Christophe Dunand)
Last sequence changes 2016-02-17 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-17 (Achraf Jemmat)
Peroxidase information: AeuPGHS02_201684 ( g17755.t1 / Ae201684_17755.1)
Name (synonym) AeuPGHS02_201684 ( g17755.t1 / Ae201684_17755.1)
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Saprolegniaceae Aphanomyces
Organism Aphanomyces euteiches    [TaxId: 100861 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AeuPGHS02_201684
start..stop
S start..stop
NcPGHS01 318 1e-102 11..461 165..638
MxPGHS01 318 1e-102 1..459 155..648
NtetPGHS01_2509 317 4e-102 11..461 164..637
SuCyOx 313 4e-101 1..459 111..585
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 108003..109391 1389  
complement(join(108003..109391))


exon

Literature and cross-references AeuPGHS02_201684 ( g17755.t1 / Ae201684_17755.1)
Cluster/Prediction ref. AphanoDB:   220615
Protein sequence: AeuPGHS02_201684 ( g17755.t1 / Ae201684_17755.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   463
PWM (Da):   %s   52551.89  
PI (pH):   %s   6.75
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSPTLFTRTA FQPATIINTW VPAWIQFVVH DLLDHNQDFN GQELRIGSQT LYKTVPIPGF PNVYGNRLDH FLDGTPAYSF TKTKGALLRL PDGSLSLPDD YLPLDGNIEA LGVQENIWFG  LSMITYILAK EHNAVVKMFH TKYPNWSGDE CFDKARLVVS ALVAKIQGLE WTKAIIQNPI GQYARDHMFY GLLGKESRKK SGVQKWLGNY ICGIWGGNLE YRGVKYATTE EFVSVYRMHS  LLPESFTVRS FNDNSNLVTF DLKDAIFEGS PKVNTNVSHL DMVYSMGTSF PGALVLNNYP SALRSVQPLQ YHHSIDLAAV DIIRDRERGV PRYNAFRRSL LLTPIKTWND LTSDPAVIAK 
LQQVYGNDVE LLDLLVGTTA EEKLPGFVFG ETIYTVFVVQ TQRRIESDRF FTEDFRPEVY TPEGYNWVES TTFASILLRH YPSLKKYLNE TDNAFLPWKA KN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold81, no intron) and RNAseq. Close to Bacteria AnPrx!!!
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGCCAA CCCTCTTCAC TCGAACGGCG TTTCAGCCGG CGACAATTAT CAACACGTGG GTTCCAGCGT GGATTCAGTT TGTCGTGCAT GATTTACTGG ACCACAATCA AGATTTCAAC  GGCCAGGAAC TTCGAATCGG CAGTCAAACG TTGTACAAGA CGGTGCCGAT TCCAGGATTT CCCAATGTCT ACGGCAACCG CCTGGACCAT TTCTTGGATG GGACGCCAGC TTACAGCTTT  ACGAAAACAA AAGGCGCGCT TCTTCGATTG CCCGATGGGT CGTTGAGTCT CCCCGACGAC TACCTTCCCC TTGATGGAAA CATAGAAGCC CTCGGTGTAC AGGAAAACAT TTGGTTTGGT  CTTTCCATGA TCACTTATAT CTTGGCGAAA GAACACAACG CAGTGGTCAA GATGTTTCAT ACCAAGTACC CCAACTGGAG TGGAGACGAA TGTTTTGACA AGGCTCGTCT TGTCGTTTCA  GCCTTGGTTG CCAAAATCCA AGGCCTCGAG TGGACCAAAG CGATCATCCA AAACCCCATC GGCCAGTACG CACGGGATCA CATGTTCTAC GGTCTCCTCG GCAAAGAGTC GCGCAAGAAA  AGTGGCGTGC AAAAGTGGCT AGGCAATTAC ATCTGTGGCA TTTGGGGAGG CAATTTGGAG TACCGCGGTG TCAAGTACGC CACGACGGAA GAGTTTGTCT CGGTCTATCG AATGCACTCG  CTGCTGCCCG AGAGCTTCAC CGTTCGCAGC TTCAACGACA ACTCGAATCT CGTGACGTTT GACTTGAAAG ATGCCATTTT CGAAGGTAGT CCCAAGGTAA ACACGAATGT CTCCCATCTC  GACATGGTTT ACTCGATGGG GACGTCGTTT CCTGGTGCAT TGGTGCTCAA CAACTACCCC TCAGCGCTAC GATCTGTCCA GCCTCTTCAA TACCACCACA GCATTGACTT GGCGGCAGTG  GACATTATAC GTGATCGTGA GCGTGGTGTG CCTCGGTACA ATGCCTTCCG TCGTAGTCTT CTCCTCACTC CCATCAAGAC TTGGAATGAT CTCACGTCGG ATCCTGCTGT GATCGCCAAG  CTCCAACAAG TCTATGGAAA TGACGTCGAG TTATTGGATC TCCTCGTGGG GACGACAGCA GAGGAGAAAC TGCCTGGTTT TGTCTTTGGG GAAACCATCT ACACGGTCTT TGTTGTCCAA  ACTCAACGCC GCATTGAGAG TGACCGCTTC TTCACCGAGG ATTTCCGCCC TGAAGTGTAC ACTCCCGAGG GCTACAACTG GGTCGAGTCG ACGACCTTCG CATCCATTCT CTTGCGTCAC 
TATCCATCGT TGAAAAAATA CCTCAACGAG ACGGACAATG CATTCTTGCC TTGGAAGGCA AAGAATTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGCCAA CCCTCTTCAC TCGAACGGCG TTTCAGCCGG CGACAATTAT CAACACGTGG GTTCCAGCGT GGATTCAGTT TGTCGTGCAT GATTTACTGG ACCACAATCA AGATTTCAAC  GGCCAGGAAC TTCGAATCGG CAGTCAAACG TTGTACAAGA CGGTGCCGAT TCCAGGATTT CCCAATGTCT ACGGCAACCG CCTGGACCAT TTCTTGGATG GGACGCCAGC TTACAGCTTT  ACGAAAACAA AAGGCGCGCT TCTTCGATTG CCCGATGGGT CGTTGAGTCT CCCCGACGAC TACCTTCCCC TTGATGGAAA CATAGAAGCC CTCGGTGTAC AGGAAAACAT TTGGTTTGGT  CTTTCCATGA TCACTTATAT CTTGGCGAAA GAACACAACG CAGTGGTCAA GATGTTTCAT ACCAAGTACC CCAACTGGAG TGGAGACGAA TGTTTTGACA AGGCTCGTCT TGTCGTTTCA  GCCTTGGTTG CCAAAATCCA AGGCCTCGAG TGGACCAAAG CGATCATCCA AAACCCCATC GGCCAGTACG CACGGGATCA CATGTTCTAC GGTCTCCTCG GCAAAGAGTC GCGCAAGAAA  AGTGGCGTGC AAAAGTGGCT AGGCAATTAC ATCTGTGGCA TTTGGGGAGG CAATTTGGAG TACCGCGGTG TCAAGTACGC CACGACGGAA GAGTTTGTCT CGGTCTATCG AATGCACTCG  CTGCTGCCCG AGAGCTTCAC CGTTCGCAGC TTCAACGACA ACTCGAATCT CGTGACGTTT GACTTGAAAG ATGCCATTTT CGAAGGTAGT CCCAAGGTAA ACACGAATGT CTCCCATCTC  GACATGGTTT ACTCGATGGG GACGTCGTTT CCTGGTGCAT TGGTGCTCAA CAACTACCCC TCAGCGCTAC GATCTGTCCA GCCTCTTCAA TACCACCACA GCATTGACTT GGCGGCAGTG  GACATTATAC GTGATCGTGA GCGTGGTGTG CCTCGGTACA ATGCCTTCCG TCGTAGTCTT CTCCTCACTC CCATCAAGAC TTGGAATGAT CTCACGTCGG ATCCTGCTGT GATCGCCAAG  CTCCAACAAG TCTATGGAAA TGACGTCGAG TTATTGGATC TCCTCGTGGG GACGACAGCA GAGGAGAAAC TGCCTGGTTT TGTCTTTGGG GAAACCATCT ACACGGTCTT TGTTGTCCAA  ACTCAACGCC GCATTGAGAG TGACCGCTTC TTCACCGAGG ATTTCCGCCC TGAAGTGTAC ACTCCCGAGG GCTACAACTG GGTCGAGTCG ACGACCTTCG CATCCATTCT CTTGCGTCAC 
TATCCATCGT TGAAAAAATA CCTCAACGAG ACGGACAATG CATTCTTGCC TTGGAAGGCA AAGAATTAG 

Retrieve as FASTA