Entry information : SpopCcP01
Entry ID 11707
Creation 2013-04-09 (Christophe Dunand)
Last sequence changes 2013-04-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-09-04 (Catherine Mathe (Scipio))
Peroxidase information: SpopCcP01
Name SpopCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP002]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Mycosphaerellaceae Mycosphaerella
Organism Septoria populicola (Mycosphaerella populicola)    [TaxId: 215467 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpopCcP01
start..stop
S start..stop
MpopCcP01 607 0 7..335 8..333
BcomCcP 503 0 11..320 9..317
ZcelCcP01 501 1e-180 11..317 10..315
MpiCcP01 496 1e-178 5..320 3..317
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14831..15838 1008  
join(14831..15838)


exon

Literature and cross-references SpopCcP01
DNA ref. JGI genome:   scaffold_41 (14831..15838)
Cluster/Prediction ref. JGI gene:   103449
Protein sequence: SpopCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336
PWM (Da):   %s   37469.46  
PI (pH):   %s   5.06
Sequence
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Send to Peroxiscan
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MSHQPTSLLP SIKQDIISLL SQPTYDDGSA GPILVRLAWH SCGTYSLSTD TGGSNGAGMR YEAEGGDPSN AGLQHARVFL EPIKAKYGDQ ITYSDLWTLA GVVAVEAMGG PRIAWKGGRT  DFVDDSKLPP RGRLPDGAQG SAHLRQVFYR MGFGDQEIVA LSGAHNLGRC HADRSGFEGA WVNAPTRFSN SYFKLMISEE WKEKVLENGT RQFVHYDEDS EEELMMLPTD LALVQDESFR 
PWVELYARDK ERFFADFAKA FAKLMELGIV RDENDRVINS DNVKGGYHSA PKKSNQPGKP DEVDRYGEAE PLRKENEEFQ KEQQQQQQPE IRSKL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCACC AACCGACCTC CCTCCTCCCC TCCATAAAAC AAGACATCAT CTCCCTCCTC TCCCAACCCA CCTACGACGA CGGCAGCGCC GGCCCAATCC TCGTCCGCCT CGCGTGGCAC  AGCTGCGGAA CCTACTCGCT CTCAACCGAC ACAGGCGGCA GCAACGGCGC AGGAATGCGG TACGAAGCCG AAGGCGGCGA CCCTTCCAAC GCAGGTCTCC AACACGCTCG CGTCTTCCTC  GAACCCATCA AAGCCAAATA CGGCGACCAA ATCACCTATT CCGATCTCTG GACGTTGGCT GGCGTCGTGG CTGTCGAAGC CATGGGTGGC CCGCGCATTG CGTGGAAAGG TGGAAGGACG  GATTTTGTGG ATGATAGTAA ACTTCCCCCT CGCGGGAGAT TACCCGATGG CGCTCAAGGG AGTGCGCATT TGAGACAGGT GTTTTATCGA ATGGGCTTTG GCGACCAGGA AATCGTGGCC  TTGTCCGGAG CCCATAATTT GGGGAGATGT CATGCCGATC GATCGGGTTT CGAGGGCGCG TGGGTGAATG CTCCGACGAG GTTTTCCAAT TCCTATTTTA AATTGATGAT TTCCGAGGAG  TGGAAGGAGA AGGTCTTGGA GAATGGGACC AGGCAGTTTG TGCATTATGA TGAGGATTCC GAGGAGGAAT TGATGATGTT GCCGACTGAC TTGGCCCTCG TACAGGATGA GAGCTTTCGG  CCGTGGGTGG AGCTGTATGC TCGGGATAAG GAGAGGTTCT TTGCGGATTT TGCCAAGGCT TTTGCAAAGT TGATGGAATT GGGCATTGTG CGAGATGAGA ATGACCGGGT GATCAATTCG  GATAATGTCA AGGGGGGATA TCACAGTGCA CCAAAAAAGA GCAATCAGCC CGGAAAGCCG GACGAGGTCG ATCGATATGG CGAGGCCGAG CCTTTGAGGA AAGAGAATGA AGAGTTCCAA 
AAGGAGCAGC AGCAGCAGCA GCAGCCGGAG ATACGATCAA AGTTGTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTCACC AACCGACCTC CCTCCTCCCC TCCATAAAAC AAGACATCAT CTCCCTCCTC TCCCAACCCA CCTACGACGA CGGCAGCGCC GGCCCAATCC TCGTCCGCCT CGCGTGGCAC  AGCTGCGGAA CCTACTCGCT CTCAACCGAC ACAGGCGGCA GCAACGGCGC AGGAATGCGG TACGAAGCCG AAGGCGGCGA CCCTTCCAAC GCAGGTCTCC AACACGCTCG CGTCTTCCTC  GAACCCATCA AAGCCAAATA CGGCGACCAA ATCACCTATT CCGATCTCTG GACGTTGGCT GGCGTCGTGG CTGTCGAAGC CATGGGTGGC CCGCGCATTG CGTGGAAAGG TGGAAGGACG  GATTTTGTGG ATGATAGTAA ACTTCCCCCT CGCGGGAGAT TACCCGATGG CGCTCAAGGG AGTGCGCATT TGAGACAGGT GTTTTATCGA ATGGGCTTTG GCGACCAGGA AATCGTGGCC  TTGTCCGGAG CCCATAATTT GGGGAGATGT CATGCCGATC GATCGGGTTT CGAGGGCGCG TGGGTGAATG CTCCGACGAG GTTTTCCAAT TCCTATTTTA AATTGATGAT TTCCGAGGAG  TGGAAGGAGA AGGTCTTGGA GAATGGGACC AGGCAGTTTG TGCATTATGA TGAGGATTCC GAGGAGGAAT TGATGATGTT GCCGACTGAC TTGGCCCTCG TACAGGATGA GAGCTTTCGG  CCGTGGGTGG AGCTGTATGC TCGGGATAAG GAGAGGTTCT TTGCGGATTT TGCCAAGGCT TTTGCAAAGT TGATGGAATT GGGCATTGTG CGAGATGAGA ATGACCGGGT GATCAATTCG  GATAATGTCA AGGGGGGATA TCACAGTGCA CCAAAAAAGA GCAATCAGCC CGGAAAGCCG GACGAGGTCG ATCGATATGG CGAGGCCGAG CCTTTGAGGA AAGAGAATGA AGAGTTCCAA 
AAGGAGCAGC AGCAGCAGCA GCAGCCGGAG ATACGATCAA AGTTGTAG 

Retrieve as FASTA