Entry information : PterCIIAB02
Entry ID 11711
Creation 2013-04-09 (Christophe Dunand)
Last sequence changes 2014-11-26 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2015-11-05 (Achraf Jemmat)
Peroxidase information: PterCIIAB02
Name PterCIIAB02
Class Asco Class II type B     [Orthogroup: CIIAB001]*
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Pleosporaceae Pyrenophora
Organism Pyrenophora teres    [TaxId: 53485 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PterCIIAB02
start..stop
S start..stop
PtritCIIAB04 269 1e-92 1..156 1..159
AalteCIIAB01 209 8e-69 1..156 1..160
ClunCIIAB02 205 2e-67 5..156 6..161
Ssrc1lsm3aCIIAB06 195 1e-63 5..156 5..159
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14711..15178 468  
join(14711..15178)


exon

Literature and cross-references PterCIIAB02
DNA ref. JGI genome:   15659 (14711..15178)
Cluster/Prediction ref. JGI gene:   434
Protein sequence: PterCIIAB02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   156 (138)
PWM (Da):   %s   16155.13 (14287.2)  
PI (pH):   %s   7.17 (6.47) Peptide Signal:   %s   cut: 19 range:19-156
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRFSSISLYA LAAAPAFALN ISSNCPAVWT KVAAELQAEF AGCTIYAHKS IRATFHDCIN NGCDGSLVLT DECSRTENSG LVSVCGKIQG WATKYNVGVA DMLQFAAAQG ISACPLGPKV 
PILIGRKDSN VAAPLNSVPG SRDPLESILA AFSAKG 

Retrieve as FASTA  
Remarks Partial sequence from genomic (BAC end, last exon is missing) . Incorrect prediction from JGI.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTTTCT CATCAATATC TCTCTATGCT CTCGCAGCAG CACCAGCCTT CGCCCTCAAC ATCTCCTCCA ACTGCCCTGC AGTCTGGACC AAAGTTGCCG CGGAACTCCA AGCAGAATTT  GCCGGATGCA CTATATATGC CCACAAATCC ATTCGCGCCA CCTTTCATGA CTGCATCAAC AATGGCTGCG ATGGCAGCCT CGTTCTGACC GACGAGTGCA GTCGCACAGA GAACTCAGGT  CTCGTGTCAG TATGCGGCAA GATCCAGGGC TGGGCCACAA AATATAACGT TGGTGTCGCC GACATGCTTC AGTTCGCCGC CGCTCAAGGC ATCTCCGCCT GCCCTCTCGG ACCAAAAGTA 
CCAATTCTAA TTGGCCGCAA GGATAGCAAC GTTGCAGCAC CTCTGAACAG CGTACCGGGA AGCCGAGACC CTCTGGAATC AATCCTAGCC GCATTCAGCG CAAAAGGG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTTTCT CATCAATATC TCTCTATGCT CTCGCAGCAG CACCAGCCTT CGCCCTCAAC ATCTCCTCCA ACTGCCCTGC AGTCTGGACC AAAGTTGCCG CGGAACTCCA AGCAGAATTT  GCCGGATGCA CTATATATGC CCACAAATCC ATTCGCGCCA CCTTTCATGA CTGCATCAAC AATGGCTGCG ATGGCAGCCT CGTTCTGACC GACGAGTGCA GTCGCACAGA GAACTCAGGT  CTCGTGTCAG TATGCGGCAA GATCCAGGGC TGGGCCACAA AATATAACGT TGGTGTCGCC GACATGCTTC AGTTCGCCGC CGCTCAAGGC ATCTCCGCCT GCCCTCTCGG ACCAAAAGTA 
CCAATTCTAA TTGGCCGCAA GGATAGCAAC GTTGCAGCAC CTCTGAACAG CGTACCGGGA AGCCGAGACC CTCTGGAATC AATCCTAGCC GCATTCAGCG CAAAAGGG 

Retrieve as FASTA