Entry information : CfioAPx-CcP03_MH18
Entry ID 11823
Creation 2013-04-29 (Christophe Dunand)
Last sequence changes 2015-04-21 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-04-21 (Christophe Dunand)
Peroxidase information: CfioAPx-CcP03_MH18
Name CfioAPx-CcP03_MH18
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP006]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Glomerellaceae Glomerella
Organism Colletotrichum fioriniae (Glomerella acutata)    [TaxId: 710243 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CfioAPx-CcP03_MH18
start..stop
S start..stop
CfioAPx-CcP03_PJ7 1031 0 1..509 1..509
ChigAPx-CcP03 728 0 77..509 1..436
CorbiAPx-CcP1 544 0 24..503 44..530
CgloAPx-CcP03_ST23 537 0 24..503 44..530
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 10408..11937 1530  
join(10408..11937)


exon

Literature and cross-references CfioAPx-CcP03_MH18
DNA ref. JGI genome:   scaffold_174 (10408..11937)
Cluster/Prediction ref. JGI gene:   1332874 [Incorrect prediction]
Protein sequence: CfioAPx-CcP03_MH18
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   509
PWM (Da):   %s   53867.71  
PI (pH):   %s   5.16
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPPQRSASLC QPPSPNVPSH KQNLPGVTPC SFGGNIAGRQ FAAEWIRTAF HDVATTDAAA GTGGLDGSIW FEVGRAENGG AAFNNTFNFF SNLYSIRASA ADLLAMSVVV ANAGCGGARM  PFRAGRVDAA VAGPAGVPEP QTPLNTTLAT FAKAGFSQTE MISLVACGHT LGGVHSRNNP HITGLDPSPD TVTKFDSTFD DFDNRIATEY VRGNTSNPLV VGRNETLNSD KHIFSSDGNK  TIRDLGCTKN GFRTACADVF TRMIDTVPAT VQLTEPVEPV NIKPYVTLAL SSNGSLAFSG WVRVRTTEGT GRDTGDLAVH LSFADRKGEG SVVVPATLDE GGVTYGLWGE TFAWYQFETA  ISAASGISSF LVHLTAPSSN ATSVYKNDGS GFPLDDALLY QASSSCVSRT SVNNERTFTV TAAVLKERAA DVVTMDVVRL VRRSEAIHRR LDVESVELAA TGEEDSGYAL FQAQVQLATS 
GWSTSFDLIL GGEKEVRVDF LKTQACPRV 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Incorrect prediction from JGI (5'end is missing and extra intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCCCCC AGAGGTCCGC ATCTCTTTGC CAGCCCCCCT CCCCAAACGT TCCATCTCAC AAACAAAACC TTCCAGGCGT GACTCCTTGC TCCTTTGGCG GGAACATCGC CGGTCGCCAG  TTCGCCGCCG AGTGGATCCG CACCGCCTTT CACGACGTAG CCACCACCGA CGCCGCGGCG GGGACAGGCG GCCTAGACGG CTCCATCTGG TTCGAGGTCG GCCGCGCCGA GAACGGCGGC  GCTGCCTTCA ACAACACTTT CAACTTCTTC AGCAACCTCT ACTCGATCCG CGCCTCCGCC GCGGACCTGC TCGCCATGAG CGTCGTCGTC GCCAACGCAG GCTGCGGCGG CGCGAGGATG  CCCTTCCGCG CAGGGCGTGT CGACGCTGCG GTTGCAGGCC CCGCGGGCGT GCCAGAGCCG CAGACGCCGC TCAACACGAC GCTGGCGACG TTTGCGAAAG CCGGCTTCAG CCAGACCGAG  ATGATTTCGC TCGTGGCGTG CGGGCATACC CTCGGCGGCG TGCATAGCCG GAATAACCCG CACATCACAG GCCTCGACCC GAGCCCGGAC ACGGTGACCA AGTTTGATAG TACGTTTGAC  GACTTTGATA ACCGGATCGC GACCGAGTAC GTGCGGGGCA ACACGTCGAA CCCGTTGGTC GTCGGGCGGA ACGAGACGCT CAACTCGGAC AAGCATATCT TCTCGTCGGA CGGGAACAAA  ACGATCAGGG ACCTGGGGTG TACCAAGAAC GGCTTCAGGA CGGCGTGCGC CGATGTCTTT ACGCGCATGA TTGATACCGT GCCCGCAACG GTGCAGTTGA CAGAGCCCGT CGAGCCCGTC  AATATCAAGC CCTACGTCAC GCTGGCCCTG AGCAGCAACG GGAGCCTTGC GTTCAGCGGC TGGGTGCGCG TGAGGACGAC GGAAGGGACG GGGCGAGACA CGGGCGATTT GGCCGTCCAC  CTGAGCTTTG CAGACCGAAA GGGCGAGGGT TCCGTTGTCG TCCCCGCGAC GCTCGACGAA GGGGGCGTCA CGTACGGCCT CTGGGGCGAG ACGTTCGCCT GGTACCAATT CGAGACGGCC  ATCAGCGCAG CGAGCGGTAT AAGCAGCTTT CTTGTCCACC TGACGGCGCC CTCCAGCAAC GCCACATCCG TGTACAAGAA CGACGGTAGC GGGTTCCCGC TAGACGACGC GCTGCTCTAC  CAAGCATCCT CCTCTTGCGT CAGCCGGACG AGCGTGAACA ACGAGCGCAC CTTCACCGTC ACGGCAGCGG TGCTGAAGGA GCGCGCGGCG GATGTGGTGA CGATGGATGT TGTGCGTCTT  GTGCGGCGTT CCGAGGCGAT CCACAGGAGG CTCGACGTCG AGAGCGTCGA ACTCGCGGCG ACGGGCGAGG AGGATAGCGG GTATGCACTT TTCCAGGCGC AGGTGCAGCT TGCGACGAGC 
GGCTGGAGCA CCAGCTTCGA TCTTATTTTG GGAGGGGAGA AGGAGGTTCG GGTCGACTTC TTGAAGACAC AAGCTTGTCC GCGTGTATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCCCCC AGAGGTCCGC ATCTCTTTGC CAGCCCCCCT CCCCAAACGT TCCATCTCAC AAACAAAACC TTCCAGGCGT GACTCCTTGC TCCTTTGGCG GGAACATCGC CGGTCGCCAG  TTCGCCGCCG AGTGGATCCG CACCGCCTTT CACGACGTAG CCACCACCGA CGCCGCGGCG GGGACAGGCG GCCTAGACGG CTCCATCTGG TTCGAGGTCG GCCGCGCCGA GAACGGCGGC  GCTGCCTTCA ACAACACTTT CAACTTCTTC AGCAACCTCT ACTCGATCCG CGCCTCCGCC GCGGACCTGC TCGCCATGAG CGTCGTCGTC GCCAACGCAG GCTGCGGCGG CGCGAGGATG  CCCTTCCGCG CAGGGCGTGT CGACGCTGCG GTTGCAGGCC CCGCGGGCGT GCCAGAGCCG CAGACGCCGC TCAACACGAC GCTGGCGACG TTTGCGAAAG CCGGCTTCAG CCAGACCGAG  ATGATTTCGC TCGTGGCGTG CGGGCATACC CTCGGCGGCG TGCATAGCCG GAATAACCCG CACATCACAG GCCTCGACCC GAGCCCGGAC ACGGTGACCA AGTTTGATAG TACGTTTGAC  GACTTTGATA ACCGGATCGC GACCGAGTAC GTGCGGGGCA ACACGTCGAA CCCGTTGGTC GTCGGGCGGA ACGAGACGCT CAACTCGGAC AAGCATATCT TCTCGTCGGA CGGGAACAAA  ACGATCAGGG ACCTGGGGTG TACCAAGAAC GGCTTCAGGA CGGCGTGCGC CGATGTCTTT ACGCGCATGA TTGATACCGT GCCCGCAACG GTGCAGTTGA CAGAGCCCGT CGAGCCCGTC  AATATCAAGC CCTACGTCAC GCTGGCCCTG AGCAGCAACG GGAGCCTTGC GTTCAGCGGC TGGGTGCGCG TGAGGACGAC GGAAGGGACG GGGCGAGACA CGGGCGATTT GGCCGTCCAC  CTGAGCTTTG CAGACCGAAA GGGCGAGGGT TCCGTTGTCG TCCCCGCGAC GCTCGACGAA GGGGGCGTCA CGTACGGCCT CTGGGGCGAG ACGTTCGCCT GGTACCAATT CGAGACGGCC  ATCAGCGCAG CGAGCGGTAT AAGCAGCTTT CTTGTCCACC TGACGGCGCC CTCCAGCAAC GCCACATCCG TGTACAAGAA CGACGGTAGC GGGTTCCCGC TAGACGACGC GCTGCTCTAC  CAAGCATCCT CCTCTTGCGT CAGCCGGACG AGCGTGAACA ACGAGCGCAC CTTCACCGTC ACGGCAGCGG TGCTGAAGGA GCGCGCGGCG GATGTGGTGA CGATGGATGT TGTGCGTCTT  GTGCGGCGTT CCGAGGCGAT CCACAGGAGG CTCGACGTCG AGAGCGTCGA ACTCGCGGCG ACGGGCGAGG AGGATAGCGG GTATGCACTT TTCCAGGCGC AGGTGCAGCT TGCGACGAGC 
GGCTGGAGCA CCAGCTTCGA TCTTATTTTG GGAGGGGAGA AGGAGGTTCG GGTCGACTTC TTGAAGACAC AAGCTTGTCC GCGTGTATGA 

Retrieve as FASTA