Entry information : PangCcP02
Entry ID 11862
Creation 2013-05-23 (Nizar Fawal)
Last sequence changes 2013-05-23 (Nizar Fawal)
Sequence status partial
Reviewer Nizar Fawal
Last annotation changes 2013-09-06 (Catherine Mathe (Scipio))
Peroxidase information: PangCcP02
Name PangCcP02
Class Cytochrome C peroxidase     [Orthogroup: CcP002]*
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pichia
Organism Pichia angusta (Hansenula polymorpha)    [TaxId: 4905 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PangCcP02
start..stop
S start..stop
PpasCcP02 319 4e-107 2..272 272..542
HburCcP01 303 2e-104 10..264 1..253
DhCcP01 306 1e-103 4..267 158..419
SpasCcP02 298 4e-102 6..266 42..300
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 443168..443989 822  
join(443168..443989)


exon

Literature and cross-references PangCcP02
DNA ref. JGI genome:   scaffold_5 (443168..443989)
Cluster/Prediction ref. JGI gene:   50044
Protein sequence: PangCcP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   273
PWM (Da):   %s   30648.89  
PI (pH):   %s   5.55
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GNYELVRQAI RECLPKPDYD DGSIGPNMVR FTWHCCAHFD RESGTGGCNG GTMRFAQEFN DPGNTGLHTA KSYLDQIHEK YSWISFADLY TLGGVVAIEA MGGPKIEWKP GRTDCPDSSK  VPPMGRLPLA TKGTEHIHEV FTQRLGFNDQ ELVALIGGGH TLGGCHVKFS GFDGSWTPHP IKFDNEFFKV LLEDTWSLEQ VPLTGMPQYY NSDHSLMMLM TDMELIKNPT FKYWIEVYAK 
DSELFMRDFA SAFAKLLELG VNRDPDGIAR TKI* 

Retrieve as FASTA  
Remarks Complete from genomics (no intron). missing 5'end.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGAAATTATG AACTCGTGAG ACAAGCGATC AGAGAATGTC TTCCAAAACC AGATTATGAT GATGGGTCTA TTGGCCCCAA CATGGTTAGG TTTACCTGGC ATTGTTGTGC CCATTTTGAC  CGTGAATCAG GTACCGGTGG ATGTAATGGG GGTACAATGA GATTCGCGCA AGAATTCAAT GATCCCGGGA ATACAGGGCT GCACACTGCT AAATCGTATC TGGATCAAAT TCACGAGAAA  TATTCTTGGA TATCTTTTGC TGATTTGTAT ACATTAGGAG GGGTGGTGGC TATTGAAGCC ATGGGGGGAC CAAAGATTGA GTGGAAGCCA GGAAGAACAG ATTGTCCAGA CTCCAGCAAA  GTGCCTCCGA TGGGAAGACT TCCATTGGCT ACAAAAGGTA CTGAACACAT TCATGAAGTG TTCACTCAAC GGCTTGGATT CAATGATCAG GAACTTGTTG CGTTGATCGG TGGTGGCCAC  ACCTTGGGTG GGTGCCACGT GAAGTTTAGT GGATTTGACG GCAGTTGGAC TCCCCATCCA ATCAAGTTTG ACAATGAGTT TTTCAAAGTG TTACTGGAGG ATACGTGGAG CCTCGAGCAA  GTCCCTCTGA CGGGCATGCC ACAGTATTAC AACTCCGATC ACAGCTTGAT GATGTTGATG ACAGATATGG AGCTGATCAA GAATCCTACA TTCAAGTATT GGATTGAAGT GTATGCAAAA 
GATTCCGAGC TATTTATGAG AGACTTTGCT TCAGCGTTTG CCAAACTATT AGAACTGGGA GTCAACAGAG ACCCTGATGG AATTGCTCGA ACGAAAATTT AG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGAAATTATG AACTCGTGAG ACAAGCGATC AGAGAATGTC TTCCAAAACC AGATTATGAT GATGGGTCTA TTGGCCCCAA CATGGTTAGG TTTACCTGGC ATTGTTGTGC CCATTTTGAC  CGTGAATCAG GTACCGGTGG ATGTAATGGG GGTACAATGA GATTCGCGCA AGAATTCAAT GATCCCGGGA ATACAGGGCT GCACACTGCT AAATCGTATC TGGATCAAAT TCACGAGAAA  TATTCTTGGA TATCTTTTGC TGATTTGTAT ACATTAGGAG GGGTGGTGGC TATTGAAGCC ATGGGGGGAC CAAAGATTGA GTGGAAGCCA GGAAGAACAG ATTGTCCAGA CTCCAGCAAA  GTGCCTCCGA TGGGAAGACT TCCATTGGCT ACAAAAGGTA CTGAACACAT TCATGAAGTG TTCACTCAAC GGCTTGGATT CAATGATCAG GAACTTGTTG CGTTGATCGG TGGTGGCCAC  ACCTTGGGTG GGTGCCACGT GAAGTTTAGT GGATTTGACG GCAGTTGGAC TCCCCATCCA ATCAAGTTTG ACAATGAGTT TTTCAAAGTG TTACTGGAGG ATACGTGGAG CCTCGAGCAA  GTCCCTCTGA CGGGCATGCC ACAGTATTAC AACTCCGATC ACAGCTTGAT GATGTTGATG ACAGATATGG AGCTGATCAA GAATCCTACA TTCAAGTATT GGATTGAAGT GTATGCAAAA 
GATTCCGAGC TATTTATGAG AGACTTTGCT TCAGCGTTTG CCAAACTATT AGAACTGGGA GTCAACAGAG ACCCTGATGG AATTGCTCGA ACGAAAATTT AG 

Retrieve as FASTA