Entry information : CduGPx04
Entry ID 11904
Creation 2013-05-27 (Christophe Dunand)
Last sequence changes 2013-05-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-27 (Christophe Dunand)
Peroxidase information: CduGPx04
Name CduGPx04
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3003]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Candida
Organism Candida dubliniensis    [TaxId: 42374 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CduGPx04
start..stop
S start..stop
CparaGPx02 237 3e-81 11..171 32..189
SpasGPx01 231 2e-79 9..171 9..168
CtanzGPx01 185 5e-61 5..171 11..174
SkluGPx01 183 4e-60 9..170 13..171
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1617357..1617872 516  
complement(join(1617357..1617872))


exon

Literature and cross-references CduGPx04
Protein ref. UniProtKB:   B9W8C2
DNA ref. GenBank:   FM992688.1 (1617357..1617872)
Protein sequence: CduGPx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   171
PWM (Da):   %s   19526.01  
PI (pH):   %s   7.18
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGNESLSNAR IYTFKIPDAY NNVIDFNQFQ NKVILIVNVA SLCGFTPQYK ELQSLYEKYH EPGLEILGFP CNQFGNQEPL QEKEIVKYCS RNFGVSFPIM KKTKVNIDSD GDESELYKYL 
KSEKPGQVGF KGVRWNFEKF IINKKGEVVA RFSSLITPLQ LEGFIEQLLS E 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, no intron)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCAATG AATCATTATC AAACGCAAGA ATATATACAT TCAAAATACC TGATGCATAT AATAATGTCA TAGATTTTAA CCAATTTCAG AATAAAGTAA TACTAATAGT CAATGTGGCA  AGTTTGTGTG GGTTCACACC TCAATACAAA GAATTGCAAC TGCTTTATGA AAAATATCAT GAACCTGGTT TAGAAATATT AGGATTTCCT TGTAATCAAT TTGGGAACCA AGAACCACTT  CAAGAAAAAG AAATAGTCAA ATATTGTAGT CGGAATTTTG GTGTCAGTTT CCCTATTATG AAGAAAACCA AAGTTAATAT AGATAGTGAT GGCGATGAAT CGGAATTGTA CAAGTACTTG  AAGTCTGAAA AGCCTGGACA GGTGGGGTTT AAAGGCGTCC GGTGGAATTT TGAAAAGTTT ATAATAAACA AAAAAGGTGA AGTTGTTGCT AGGTTTAGCT CTCTAATAAC ACCATTACAA 
CTCGAAGGGT TTATTGAACA ACTTTTATCA GAATAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCAATG AATCATTATC AAACGCAAGA ATATATACAT TCAAAATACC TGATGCATAT AATAATGTCA TAGATTTTAA CCAATTTCAG AATAAAGTAA TACTAATAGT CAATGTGGCA  AGTTTGTGTG GGTTCACACC TCAATACAAA GAATTGCAAC TGCTTTATGA AAAATATCAT GAACCTGGTT TAGAAATATT AGGATTTCCT TGTAATCAAT TTGGGAACCA AGAACCACTT  CAAGAAAAAG AAATAGTCAA ATATTGTAGT CGGAATTTTG GTGTCAGTTT CCCTATTATG AAGAAAACCA AAGTTAATAT AGATAGTGAT GGCGATGAAT CGGAATTGTA CAAGTACTTG  AAGTCTGAAA AGCCTGGACA GGTGGGGTTT AAAGGCGTCC GGTGGAATTT TGAAAAGTTT ATAATAAACA AAAAAGGTGA AGTTGTTGCT AGGTTTAGCT CTCTAATAAC ACCATTACAA 
CTCGAAGGGT TTATTGAACA ACTTTTATCA GAATAG 

Retrieve as FASTA