Entry information : MbicuGPx01
Entry ID 11926
Creation 2013-05-28 (Nizar Fawal)
Last sequence changes 2013-10-15 (Catherine Mathe (Scipio))
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2013-10-15 (Catherine Mathe (Scipio))
Peroxidase information: MbicuGPx01
Name MbicuGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3003]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Metschnikowiaceae Metschnikowia
Organism Metschnikowia bicuspidata    [TaxId: 27322 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MbicuGPx01
start..stop
S start..stop
ClusGPx02 202 5e-68 6..161 1..156
SkuGPx01 199 1e-66 5..162 4..161
SmiGPx03 193 2e-64 5..161 4..160
SpaGPx01 193 2e-64 5..162 4..161
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5193132..5193623 492  
join(5193132..5193623)


exon

Literature and cross-references MbicuGPx01
DNA ref. JGI genome:   scaffold_1 (5193132..5193623)
Cluster/Prediction ref. JGI gene:   36748
Protein sequence: MbicuGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   163
PWM (Da):   %s   18279.49  
PI (pH):   %s   9.07
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQDDTFYSLT ASHVPGKTYS FDLLKGKVVL IVNVASLCGF TPQYNELQAL YQKYQGKGLE ILAFPCNQFG SQEPYDNAHI QKYVQSHFNV SFPILSKVLV NGRGEDPIYR HLKLKKAGAL 
GFCGVRWNFE KFLVDRNGDV VARFDTVTPP KTLEPMIVRL LAA 

Retrieve as FASTA  
Remarks complete sequence from genomics (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGATG ACACATTTTA CTCATTGACC GCAAGTCATG TACCCGGAAA AACATACAGC TTTGATCTGC TAAAAGGCAA GGTCGTTCTT ATCGTTAATG TCGCTTCTTT ATGCGGTTTC  ACCCCACAGT ACAACGAGTT GCAAGCTCTC TACCAGAAGT ATCAGGGCAA AGGACTTGAA ATATTGGCAT TCCCATGCAA TCAGTTCGGC AGTCAAGAAC CATACGATAA TGCTCATATA  CAAAAGTACG TCCAATCACA TTTTAATGTC TCTTTTCCAA TTCTATCCAA AGTGCTTGTG AATGGTAGAG GAGAAGACCC TATATACCGT CATTTGAAGC TGAAAAAGGC AGGGGCTCTA  GGTTTTTGTG GGGTTCGTTG GAACTTCGAA AAGTTTCTTG TCGATCGCAA TGGCGATGTT GTCGCCAGGT TTGATACAGT TACACCTCCA AAAACACTAG AACCAATGAT TGTTCGACTC 
CTTGCTGCGT GA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAGATG ACACATTTTA CTCATTGACC GCAAGTCATG TACCCGGAAA AACATACAGC TTTGATCTGC TAAAAGGCAA GGTCGTTCTT ATCGTTAATG TCGCTTCTTT ATGCGGTTTC  ACCCCACAGT ACAACGAGTT GCAAGCTCTC TACCAGAAGT ATCAGGGCAA AGGACTTGAA ATATTGGCAT TCCCATGCAA TCAGTTCGGC AGTCAAGAAC CATACGATAA TGCTCATATA  CAAAAGTACG TCCAATCACA TTTTAATGTC TCTTTTCCAA TTCTATCCAA AGTGCTTGTG AATGGTAGAG GAGAAGACCC TATATACCGT CATTTGAAGC TGAAAAAGGC AGGGGCTCTA  GGTTTTTGTG GGGTTCGTTG GAACTTCGAA AAGTTTCTTG TCGATCGCAA TGGCGATGTT GTCGCCAGGT TTGATACAGT TACACCTCCA AAAACACTAG AACCAATGAT TGTTCGACTC 
CTTGCTGCGT GA 

Retrieve as FASTA