Entry information : AtrPrx02(AmTr_v1.0_scaffold00037.7)
Entry ID 1202
Creation 2005-06-13 (Christophe Dunand)
Last sequence changes 2005-06-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-10 (Christophe Dunand)
Peroxidase information: AtrPrx02(AmTr_v1.0_scaffold00037.7)
Name AtrPrx02(AmTr_v1.0_scaffold00037.7)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx02
start..stop
S start..stop
AfpPrx03 467 2e-167 1..326 1..326
AcoPrx30 466 5e-167 1..326 1..326
NtPrx20-1A 461 1e-164 4..326 1..329
VvPrx02 457 2e-163 1..325 1..325
Literature and cross-references AtrPrx02(AmTr_v1.0_scaffold00037.7)
Literature dePamphilis,C., Carlson,J., Ma,H., Soltis,D., Soltis,P.,Oppenheimer,D., Frohlich,M., Doyle,J., Tanksley,S., Webb,M., Leebens-Mack,J., Landherr,L., Ilut,D. and Wall,K.
unpublished (2003)
EST ref. GenBank:   CV002678
Protein sequence: AtrPrx02(AmTr_v1.0_scaffold00037.7)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (303)
PWM (Da):   %s   35543.9 (33201.7)  
PI (pH):   %s   8.15 (7.99) Peptide Signal:   %s   cut: 24 range:24-326
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGRLNSYGVM GVLVLALLGT CHGELKMGFY DKTCPNAEKI VSDFMKEHIP KVPILAASFL RMHFHDCFVR GCDGSVLLNS TSNSTSEKEA NPNLTLRGFD QIDRVKVLVE AECPGVVSCA  DILALSARDS VGVLGGPFWK VPTGRRDGSV SLRAEANAQI PAPTNNFTTL KESFANKSLS VKDLVLLSGG HTIGIARCTS FSRRLYNFTG VGDQDPSMDS NYVANLKQRK CRTQTDNTTI 
VEMDPGSFRT FDLSYYRLVL KRRGLFTSDA ALITDSTSKS LVEDLTNGTP EDFFKEFAKS MVKMGEIDVK TGSSGEIRKH CAFVNS 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 4 EST sequences. Assembly by PeroxiBase team (CV002678, CV003677, CD482223 and CV009558). From early male and female flower buds.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGAGGT TGAACAGTTA TGGAGTAATG GGTGTCTTAG TGTTGGCTCT TTTGGGCACC TGCCATGGTG AATTGAAAAT GGGTTTTTAT GATAAAACAT GCCCAAACGC TGAGAAGATT  GTTTCAGACT TCATGAAGGA GCACATACCA AAAGTACCCA TATTGGCTGC TAGTTTTCTC AGGATGCACT TCCATGACTG CTTTGTTAGA GGATGCGATG GATCTGTATT GCTGAACTCC  ACATCAAACA GCACATCAGA AAAGGAAGCA AATCCCAACC TCACGCTCCG GGGTTTCGAC CAGATCGATA GAGTGAAAGT CTTAGTCGAA GCAGAATGCC CTGGCGTCGT GTCCTGTGCC  GACATTCTCG CTCTGTCTGC AAGAGATTCA GTTGGCGTTC TAGGAGGACC CTTTTGGAAG GTGCCCACGG GACGAAGAGA TGGGAGTGTT TCTCTCAGAG CCGAGGCCAA TGCTCAAATT  CCAGCCCCTA CTAATAACTT CACCACTCTC AAAGAATCAT TTGCCAACAA AAGCCTCAGT GTCAAGGATC TCGTTCTGCT ATCGGGTGGA CACACTATTG GAATCGCTCG CTGCACCTCA  TTTAGCAGAA GACTCTACAA TTTCACTGGA GTTGGAGACC AGGACCCTTC AATGGACAGC AACTATGTAG CCAACCTTAA GCAGAGGAAA TGCAGAACTC AAACTGATAA CACAACCATT  GTTGAGATGG ATCCTGGGAG CTTCAGGACC TTTGATCTCT CATACTACCG CCTAGTTCTT AAGAGAAGAG GGCTCTTCAC CTCTGATGCA GCTCTCATTA CTGACTCCAC TTCCAAATCC  TTGGTCGAAG ATCTTACCAA TGGAACACCT GAAGATTTCT TCAAGGAATT CGCAAAATCG ATGGTGAAAA TGGGGGAAAT TGATGTGAAA ACAGGTAGCT CTGGTGAGAT TAGGAAGCAC 
TGTGCTTTTG TGAATAGCTA G 

Retrieve as FASTA