Entry information : AtrPrx03
Entry ID 1203
Creation 2005-06-13 (Christophe Dunand)
Last sequence changes 2005-06-13 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2008-06-25 (Christophe Dunand)
Peroxidase information: AtrPrx03
Name AtrPrx03
Class Class III peroxidase    [Orthogroup: Prx028]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx03
start..stop
S start..stop
PtPrx17 429 3e-152 24..321 35..337
GbPrx04 429 4e-152 8..321 16..329
VvPrx19 425 2e-150 24..321 32..333
CpapPrx61 423 9e-150 32..322 40..333
Literature and cross-references AtrPrx03
Literature dePamphilis,C., Soltis,D., Soltis,P., Farmerie,W., Ma,H., Tanksley,S., Leebens-Mack,J., Field,D., Buzgo,M., Kim,S., Ilut,D., Landherr,L., Hu,Y., Wall,K., Albert,V., Carlson,J., Doyle,J., Frohlich,M., Miller,W., Oppenheimer,D. and Theissen,G.
unpublished (2002)
EST ref. GenBank:   CD483197
Protein sequence: AtrPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335 (313)
PWM (Da):   %s   35329.35 (33403.4) Transmb domain:   %s   i2-24o
PI (pH):   %s   4.57 (4.57) Peptide Signal:   %s   cut: 23 range:23-335
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVVVAGWAVG LTGACLVGGG AGGGSLLREN AYETSCPDAE SIVFSWVENA AAQDPRMAAS LLRLHFHDCF VNGCDASVLL DDTATFVGEK SAAPNVNSLR GFEVIDGIKG DLEMACPQTV  SCADILAMAA RDSVLLSGGP TWQVQLGRKD SLTASKAAAN NNIPGPNSNV ANLVSKFQNV GLTPQDMVTL SGAHTIGMAR CSTFRSRLQS NSGDDVDREF LASLQQLCSV NSNMTLAVLD 
VGTPAVFDNE YYANLASGQG LLSSDQALFA EGGITREVVE NYASDTEFFF KNFRMSMLRM GAIKPLTGSS GEIRRNCRSI NLIYSICFLV VSLSL 

Retrieve as FASTA  
Remarks Complete sequence from 7 EST. From early (male and female) flower buds . Assembly was performed by the PeroxiBase team. Accession are : CD483197, CV000584, CV003026, CV459429, CD483319, CO999010 and CV006807. STOP codon is not clearly defined, and is given differently in two accessions (CV000584 gives the extra sequence LIYSICFLVVSLSL; CD483319 does not).