Entry information : LuAPx104(Lus10019781|PACid:23164073)
Entry ID 12037
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-11 (Qiang Li)
Peroxidase information: LuAPx104(Lus10019781|PACid:23164073)
Name LuAPx104(Lus10019781|PACid:23164073)
Class Ascorbate peroxidase    [Orthogroup: APx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuAPx104
start..stop
S start..stop
LuAPx79 574 0 1..285 1..285
LsaAPx02 480 6e-174 1..285 1..285
HaAPx03 475 6e-172 1..285 1..285
CiAPx02 474 9e-172 1..282 1..282
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7366..7478 113 N° 2 7157..7281 125 N° 3 7008..7057 50 N° 4 6560..6625 66
N° 5 6424..6472 49 N° 6 5136..5218 83 N° 7 4972..5051 80 N° 8 4774..4876 103
N° 9 4162..4350 189  
complement(join(4162..4350,4774..4876,4972..5051,5136..5218,6424..6472,6560..662 5,7008..7057,7157..7281,7366..7478))


exon

Literature and cross-references LuAPx104(Lus10019781|PACid:23164073)
DNA ref. Phytozome 11:   scaffold1491 (7478..4162)
Protein sequence: LuAPx104(Lus10019781|PACid:23164073)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   286
PWM (Da):   %s   31374.26 Transmb domain:   %s   o256-278i
PI (pH):   %s   8.22
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAYPIVDAAYLKEVDKARRDLRALISSKNCAPIMLRLAWHDAGTYDKNTKTGGPNGSIRNDEELAHGANSGLKIALDFEEVKAKHPKITYADLFLAGVVAVEVTGGPTIDFLPGRKDSKISLKEGRLPDAKKGSIHLKDVFHRMGLSDKDIVALSGAHTGRAHSNRSGFEGPWTKEPLKFDNTYFVELLKGETEGLLKLSTDNALLDDPAFRPFVELYADEEAFFKDYATAHKKLSELGFSPASKVTQKDSTVLAQGTVGIVVTAAVMFFSYMYEVHRRSK*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction. Extra 5' end.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTACCCCATCGTCGATGCCGCTTACCTCAAGGAAGTCGACAAGGCTCGCCGCGATCTCCGCGCTCTCATCTCCTCCAAGAACTGCGCTCCGATCATGCTGCGCTTGGCGTAACCG
TCCTATTGCTGTTTTCGTTTTCTCAATTTGACTTTGCTTGTTGGTTTCGTGATCTTCGCCTTTCGTAAATGTTTCAGTTGGCACGACGCCGGGACGTATGATAAGAACACCAAGACCGGT
GGACCTAATGGCTCTATTAGGAACGACGAGGAGCTGGCCCACGGTGCTAACAGTGGCTTGAAGATCGCTCTGGATTTCTGCG
GTGAGATTAATGTCTTCCGTTTGTTTCTCACAGTTTTA
ATGTGCTCGTTTTGGAGTTATGGTTGATTGCTGAACTGAGTGTTTTTACCTTGCTCTGTAGAGGAAGTGAAGGCCAAGCATCCTAAAATCACTTACGCCGATTTGTTCCAGGTGATTGAT
TTTTATGAGTTTGTTTGATCATTTCTGCCGCAGACGTTCTCTCCCGGGCTGTTTGTTTGAATTGTGAGACTTGATTCTCTTGCCTTGAATATCCTAGTGTTAGATGGTAGTGAAGTGTGA
AGGATTTGGTTAGCAGTATTATCTACGCATCTGTATTGCATGATTAGAAATCTTAAGGAAAGTTTAGAAACACGACTTTCATCTACATTCCTTTGATGAATTAGTCAATGTGCTTCTAGT
TTCTTGTTCATTACTTTGACAGAACGCAGTGTTCAATTTAGATTATCATCTGATGACTGAGAGCTGACAACTGCTCTCGAATTAGAATCTATTTTTTACTGCCTACTAATTCTGTTTGTA
TGCTTCATTGTAGCTGGCTGGTGTCGTTGCAGTTGAGGTCACTGGAGGTCCAACCATCGATTTTCTCCCTGGCAGGAAGGTATGTGACCGTTGGCTAATAGTTATACAACTACAATGTAT
TTAGCCGATTACATTTTTTGAAGTTACTGACTGAGATGTTCGTCAGGATTCAAAAATTTCCCTCAAGGAAGGGCGACTTCCGGATGCCAAAAAAGGTATTAACGATTCAAGATATTAGCT
CTTGATTTACTCATGGCATCTTATAATGTGTCAAATGTCATGCGTTGCATAGTACCAGTGAATTCTATCTTCAAGCCCATTGTCAGCCATAATATTTTGTCTAGAATGTGGACAGATGCT
TTTTTGGGGGACTGACAAACTATGGTTTCTAAGTCATACATAGCTCACTTGAATTCCTATCCTTTCACAATGTGGTCTTGCTTGTACCCGAACCTGAGATGAGTGTTTCTTGTGAGGGTA
AATGGTAACATAACAGTCTGAAGGCTTCTCGATTAATGAATATCTAGCTTTTGAGTGCATATACTAGTGACGACTGGTATAGTTTCACCAATATTTGTCACTGATCGTTAATTCTATGTT
GATCTCCTTGAAATCCCTAGCTTTCCTCTCTCTTCGTATGAGTATGGCGGCAGTGGTTTGTGATGGTGGAAGAAAATTAGAGTTTGTTAATATTCTCAGAAATGATTTTCCTTAATCATC
GCTTAATATTTAAGTTTTTCCTTTAACATGTTGTTGGAAAGCCAGTTCATTGGAACATAGTCCACTGCACCAGTGTTCTTGTTCCTTAAATCAATCTTTCCAAGTGTTGATGTTTCTAAG
AATTTTCTTTGAAATATCCTTCAGGGTGCCAGCCGTAGGTGATGATGCTTTTGAATTTTTTTGAGGTTTCTTTCTGGCATCTTAGAATTTCCTGGGCTCTCAGATTTTTCTTTGAATTCC
TAGGAGATAGCTAGCCTCTGATAGCCTCCCAGTAACGTTTATATCCCTTAAAGAAACTAAGAAAGGGCTATATGCATTGGCCTTGTTGTCCTAAATCAGGCCACTTTTTCACAACTGACT
ATCTATTTTCTAACCTATGGAAGCATGCACGGTTAGATTCATGTTTCCAAGGCTTAGTAGCTTTCGCCTTATGTAGATTCCCAAGGGTCATCCATGAGGATTCATGCAATGTATTAAGGT
GAAGTGCAACACTTTTTTTACGTGATCGTTGAAACGTTTCTTGTTGGTCACAACTTACCTAGTTCTTAGAGTCCCATTTGCTATCTTCATTGCAGGTTATTTGTTCTCTTACCTAGTTAA
TTCACCGTGTGGCATATCATCTTTGTTGCGAGTGACTGTCCTCCGTTTCATTATAGAATTGCTGGATTCATTCTACATAGTCTGGTTAATTTTGTGCTAGGTTCAATTCATTTGAAGGAC
GTATTCCATAGGATGGGTCTGTCTGATAAGGATATTGTGGCACTATCAGGAGCCCATACTCTG
GTAATTTCCTACAACTTATCTATTTCCTTTAGCAATACTAGAATAAACAAACCTTAA
CTTTCCAGTCTAAATGGTGTTTGGCAGGGAAGGGCACATTCAAATAGATCAGGCTTTGAAGGCCCATGGACCAAGGAACCACTGAAGTTTGACAATACATACTTCGTGTAAGCTTCTGAA
TTCACAGTAGACTAGCATTGGTCACAGGAATCGTGCAAAAACCACCCGGGTCAAAATCATGTTTCCATGCTTGTTATTCCAGGGAACTGCTGAAGGGTGAGACTGAGGGACTACTCAAAC
TCTCAACTGACAATGCCTTGTTGGATGATCCCGCTTTCCGTCCTTTCGTTGAGCTTTATGCAAAG
GTAGCGCCACAAACATTTTGTTTATCAAGTTTTCTCTCTTCTTGCTTGATCTACG
CATCCAAACTCAGTATTTTTATCCTTCGTAAATCATAATACTAGAAATGATTCTGGCCCTTCTAATCTGCCATATTAAACTGACGTCCCTAAGCTGTAGAGTATAGACTCGCACCGGAGA
TTTTTTGTTCGTGGTTTTGGACTTTTGGTCACAGGTTCCGTTTGTTCTCCATACTGAGTCTATCCAACTTCTTTTGAGTAAAACTAATACCATACCTACGTACACTAGTAGTCTCTGGAA
ATCGGTACCGTCTTTTTCTTGACATGTAACTAAAAGTATATCGGAAACCAAAATAGCATCAAATTCGCGACTTGGCCGTATCGTTCTTATTTTATATGCATGATGCTTGATTCTGCTTGT
TATGACAGGACGAAGAAGCATTCTTCAAGGACTACGCTACCGCGCACAAGAAACTCTCGGAACTAGGCTTCTCCCCAGCCTCCAAGGTAACTCAGAAAGACAGCACCGTACTCGCACAGG
GAACAGTTGGAATAGTGGTAACTGCGGCAGTTATGTTCTTCAGCTACATGTACGAAGTCCACAGGCGATCCAAGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTACCCCATCGTCGATGCCGCTTACCTCAAGGAAGTCGACAAGGCTCGCCGCGATCTCCGCGCTCTCATCTCCTCCAAGAACTGCGCTCCGATCATGCTGCGCTTGGCTTGGCAC
GACGCCGGGACGTATGATAAGAACACCAAGACCGGTGGACCTAATGGCTCTATTAGGAACGACGAGGAGCTGGCCCACGGTGCTAACAGTGGCTTGAAGATCGCTCTGGATTTCTGCG
AG
GAAGTGAAGGCCAAGCATCCTAAAATCACTTACGCCGATTTGTTCCAG
CTGGCTGGTGTCGTTGCAGTTGAGGTCACTGGAGGTCCAACCATCGATTTTCTCCCTGGCAGGAAGGATTCA
AAAATTTCCCTCAAGGAAGGGCGACTTCCGGATGCCAAAAAAG
GTTCAATTCATTTGAAGGACGTATTCCATAGGATGGGTCTGTCTGATAAGGATATTGTGGCACTATCAGGAGCCCAT
ACTCTG
GGAAGGGCACATTCAAATAGATCAGGCTTTGAAGGCCCATGGACCAAGGAACCACTGAAGTTTGACAATACATACTTCGTGGAACTGCTGAAGGGTGAGACTGAGGGACTACTC
AAACTCTCAACTGACAATGCCTTGTTGGATGATCCCGCTTTCCGTCCTTTCGTTGAGCTTTATGCAAAG
GACGAAGAAGCATTCTTCAAGGACTACGCTACCGCGCACAAGAAACTCTCG
GAACTAGGCTTCTCCCCAGCCTCCAAGGTAACTCAGAAAGACAGCACCGTACTCGCACAGGGAACAGTTGGAATAGTGGTAACTGCGGCAGTTATGTTCTTCAGCTACATGTACGAAGTC
CACAGGCGATCCAAGTAG

Retrieve as FASTA