Entry information : AtrPrx06
Entry ID 1206
Creation 2006-08-08 (Christophe Dunand)
Last sequence changes 2006-08-08 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2008-06-25 (Christophe Dunand)
Peroxidase information: AtrPrx06
Name AtrPrx06
Class Class III peroxidase     [Orthogroup: Prx010]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx06
start..stop
S start..stop
ShPrx06-1A 237 4e-79 1..158 21..178
ShPrx06-1B 232 3e-77 1..158 22..179
LePrx71 226 5e-75 1..158 20..177
PhPrx05 221 1e-74 1..158 18..175
Literature and cross-references AtrPrx06
Literature dePamphilis,C., Carlson,J., Ma,H., Soltis,D., Soltis,P.,Oppenheimer,D., Frohlich,M., Doyle,J., Tanksley,S., Webb,M., Leebens-Mack,J., Landherr,L., Ilut,D. and Wall,K.
unpublished (2003)
EST ref. GenBank:   CV003014 [5' end]
Protein sequence: AtrPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   177
PWM (Da):   %s   18756.41  
PI (pH):   %s   7.71
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAYANLSPNF YASSCPDLLS TVQDVVCDAV SKETRAAASL LRLHFHDCFV QGCDASVLLD DTSTFTGEKT ARPNAGSLRR FDIIDEIKKQ VECICPGVVS CADILALAAR DSVVALGGPT 
WTVPLGRRDS KTASLSLANS DLAPGSFNLG QLISNFAKTR A*SKRFGGSI RGSYNWSS 

Retrieve as FASTA  
Remarks 1 EST sequence (early female flower buds), 3’ end is missing, START predicted with GenScan and FGENESH. Stop codon at position 161.