Entry information : LuPrx129(Lus10024207|PACid:23175799)
Entry ID 12081
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx129(Lus10024207|PACid:23175799)
Name LuPrx129(Lus10024207|PACid:23175799)
Class Class III peroxidase     [Orthogroup: Prx014]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx129
start..stop
S start..stop
LuPrx55 526 0 1..272 58..329
LuPrx56 355 3e-124 1..272 59..323
MePrx58 351 2e-122 1..272 65..328
RcPrx36 351 2e-122 1..272 63..326
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 219051..219869 819  
join(219051..219869)


exon

Literature and cross-references LuPrx129(Lus10024207|PACid:23175799)
DNA ref. Phytozome 12:   scaffold165 (219051..219869)
Protein sequence: LuPrx129(Lus10024207|PACid:23175799)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   272
PWM (Da):   %s   29512.82  
PI (pH):   %s   8.04
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAASLIRLQF HDCFAHGCDA SVLLDQTGTS TQTEKTAIPN RRFAKTFQVI EDAKSSLERM CPGVVSCADI IAVAARDASA AVEGPTWDVK LGRRDSDAAF LSEANSDIPG PKDDLPTLIA  EFQKKGLTAR EMVVLSGAHT LGFAQCFTFR DRIYDTNGTN AAVTKIIDPD FARKKRKACP AQGGDRLLAP LDVVTPKSFD NNYFKTLMRK KGLLESDQAL YSGGSTDTIV EEYSRDGNKF 
STDFAAAMVK MGDIGVMTGN NGQIRKVCRR AN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCGT CGTTAATCCG CCTCCAATTC CACGACTGCT TCGCCCACGG CTGCGACGCT TCGGTCCTAC TCGACCAAAC CGGAACCTCC ACCCAAACCG AGAAAACCGC CATCCCGAAT  CGAAGATTCG CGAAAACCTT CCAGGTCATC GAGGACGCTA AATCTAGCCT GGAAAGGATG TGCCCTGGCG TCGTCTCTTG CGCCGACATT ATCGCGGTCG CCGCTAGAGA CGCTTCTGCC  GCCGTGGAGG GACCCACCTG GGATGTGAAG CTGGGGAGAC GAGATTCGGA CGCCGCGTTT CTATCTGAAG CGAATTCGGA CATTCCCGGG CCTAAAGATG ACCTCCCGAC GCTGATTGCT  GAGTTCCAGA AAAAGGGGCT TACCGCCAGG GAAATGGTTG TCTTATCGGG AGCTCATACG TTGGGATTCG CGCAGTGCTT TACGTTCCGC GACAGGATCT ACGATACTAA CGGGACGAAT  GCGGCGGTGA CCAAAATTAT CGATCCCGAT TTCGCGAGGA AGAAGAGGAA GGCTTGCCCG GCGCAGGGCG GAGATAGGTT GCTGGCGCCG CTTGATGTGG TGACGCCCAA GTCGTTTGAT  AATAACTATT TCAAGACGCT GATGAGGAAG AAGGGGCTTT TGGAGTCTGA TCAGGCGCTT TATAGCGGCG GCTCCACCGA TACGATTGTT GAGGAGTACA GTAGGGACGG GAACAAGTTT 
AGTACGGATT TCGCGGCGGC GATGGTGAAG ATGGGTGATA TCGGAGTGAT GACTGGTAAT AATGGTCAGA TTAGGAAGGT TTGCAGGAGA GCCAATTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCGT CGTTAATCCG CCTCCAATTC CACGACTGCT TCGCCCACGG CTGCGACGCT TCGGTCCTAC TCGACCAAAC CGGAACCTCC ACCCAAACCG AGAAAACCGC CATCCCGAAT  CGAAGATTCG CGAAAACCTT CCAGGTCATC GAGGACGCTA AATCTAGCCT GGAAAGGATG TGCCCTGGCG TCGTCTCTTG CGCCGACATT ATCGCGGTCG CCGCTAGAGA CGCTTCTGCC  GCCGTGGAGG GACCCACCTG GGATGTGAAG CTGGGGAGAC GAGATTCGGA CGCCGCGTTT CTATCTGAAG CGAATTCGGA CATTCCCGGG CCTAAAGATG ACCTCCCGAC GCTGATTGCT  GAGTTCCAGA AAAAGGGGCT TACCGCCAGG GAAATGGTTG TCTTATCGGG AGCTCATACG TTGGGATTCG CGCAGTGCTT TACGTTCCGC GACAGGATCT ACGATACTAA CGGGACGAAT  GCGGCGGTGA CCAAAATTAT CGATCCCGAT TTCGCGAGGA AGAAGAGGAA GGCTTGCCCG GCGCAGGGCG GAGATAGGTT GCTGGCGCCG CTTGATGTGG TGACGCCCAA GTCGTTTGAT  AATAACTATT TCAAGACGCT GATGAGGAAG AAGGGGCTTT TGGAGTCTGA TCAGGCGCTT TATAGCGGCG GCTCCACCGA TACGATTGTT GAGGAGTACA GTAGGGACGG GAACAAGTTT 
AGTACGGATT TCGCGGCGGC GATGGTGAAG ATGGGTGATA TCGGAGTGAT GACTGGTAAT AATGGTCAGA TTAGGAAGGT TTGCAGGAGA GCCAATTAA 

Retrieve as FASTA