Entry information : LuPrx130(Lus10024208|PACid:23175805)
Entry ID 12083
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx130(Lus10024208|PACid:23175805)
Name LuPrx130(Lus10024208|PACid:23175805)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx130
start..stop
S start..stop
LuPrx58 632 0 1..321 1..319
LuPrx54 617 0 1..321 1..322
LuPrx56 571 0 4..321 7..324
MePrx58 478 6e-172 2..320 13..328
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 226888..227853 966  
complement(join(226888..227853))


exon

Literature and cross-references LuPrx130(Lus10024208|PACid:23175805)
DNA ref. Phytozome 11:   scaffold165 (227853..226888)
Protein sequence: LuPrx130(Lus10024208|PACid:23175805)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (298)
PWM (Da):   %s   35065.73 (32408.3)  
PI (pH):   %s   8.57 (8.20) Peptide Signal:   %s   cut: 24 range:24-321
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKSAFWALL LMLLRIAISQ SQAQQQLSTN FYANSCPNAL STIRRSITTA ISRERRMAAS LLRLHFHDCF VQGCDASILL DQTPTIESEK TAAPNDKSAR GYKVIDAAKA QVERICPGVV  SCADIIAVAA RDASAYVGGP SWNVKLGRRD STSAFPDMAL TDLPFFKEDL QSLIDRFQGK GLSPRDMVAL SGAHTLGQAQ CFTFRDRIYS NGTDIDAGFA STRRRRCPVE GGDETLAPLD 
LVTPNSFDNN YFRDLVQRKG LLVTDQVLFN GGSTDSIVLE YSRNRARFNG DFAAAMIRMG DIQPLTGSAG QIRRICGAVN N* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAAT CAGCATTTTG GGCACTGTTA CTCATGCTTC TGAGAATTGC AATAAGCCAG TCCCAAGCAC AACAACAACT GTCCACAAAC TTCTACGCCA ATTCATGTCC CAATGCTCTC  TCCACCATAA GGAGATCCAT CACCACTGCC ATCTCCAGGG AGCGAAGAAT GGCCGCGTCT CTACTTCGTC TTCATTTCCA CGACTGCTTT GTCCAAGGAT GCGATGCTTC CATATTGCTC  GACCAAACAC CGACCATCGA ATCTGAGAAA ACCGCTGCTC CAAATGACAA ATCAGCTCGA GGCTACAAAG TCATCGATGC TGCCAAGGCC CAGGTGGAGA GGATATGCCC TGGCGTTGTG  TCCTGCGCGG ACATTATCGC GGTTGCTGCC AGAGACGCTT CTGCATATGT GGGAGGCCCC TCTTGGAACG TGAAGCTTGG CAGAAGAGAT TCGACTTCTG CTTTCCCTGA TATGGCTCTT  ACTGACTTGC CGTTCTTCAA AGAGGACCTT CAATCTCTTA TCGATCGGTT CCAGGGGAAA GGGCTTAGCC CTAGAGACAT GGTCGCACTC TCTGGGGCTC ATACTTTGGG TCAAGCTCAA  TGCTTCACCT TTCGCGATAG AATTTATAGC AATGGTACCG ACATTGATGC TGGATTCGCG AGCACAAGAA GACGTAGATG CCCTGTGGAA GGGGGAGACG AGACGTTAGC CCCGTTAGAT  TTGGTGACGC CCAACTCGTT TGATAATAAC TACTTCAGGG ATCTAGTGCA GAGGAAGGGA CTCCTTGTAA CCGACCAGGT TCTCTTCAAT GGGGGCTCTA CTGATAGTAT TGTGCTAGAG  TACAGCAGGA ACCGAGCCAG GTTCAATGGC GATTTCGCCG CTGCCATGAT TAGGATGGGT GACATCCAAC CATTAACCGG TTCTGCTGGG CAAATCAGGA GGATATGTGG CGCCGTCAAC 
AACTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAAT CAGCATTTTG GGCACTGTTA CTCATGCTTC TGAGAATTGC AATAAGCCAG TCCCAAGCAC AACAACAACT GTCCACAAAC TTCTACGCCA ATTCATGTCC CAATGCTCTC  TCCACCATAA GGAGATCCAT CACCACTGCC ATCTCCAGGG AGCGAAGAAT GGCCGCGTCT CTACTTCGTC TTCATTTCCA CGACTGCTTT GTCCAAGGAT GCGATGCTTC CATATTGCTC  GACCAAACAC CGACCATCGA ATCTGAGAAA ACCGCTGCTC CAAATGACAA ATCAGCTCGA GGCTACAAAG TCATCGATGC TGCCAAGGCC CAGGTGGAGA GGATATGCCC TGGCGTTGTG  TCCTGCGCGG ACATTATCGC GGTTGCTGCC AGAGACGCTT CTGCATATGT GGGAGGCCCC TCTTGGAACG TGAAGCTTGG CAGAAGAGAT TCGACTTCTG CTTTCCCTGA TATGGCTCTT  ACTGACTTGC CGTTCTTCAA AGAGGACCTT CAATCTCTTA TCGATCGGTT CCAGGGGAAA GGGCTTAGCC CTAGAGACAT GGTCGCACTC TCTGGGGCTC ATACTTTGGG TCAAGCTCAA  TGCTTCACCT TTCGCGATAG AATTTATAGC AATGGTACCG ACATTGATGC TGGATTCGCG AGCACAAGAA GACGTAGATG CCCTGTGGAA GGGGGAGACG AGACGTTAGC CCCGTTAGAT  TTGGTGACGC CCAACTCGTT TGATAATAAC TACTTCAGGG ATCTAGTGCA GAGGAAGGGA CTCCTTGTAA CCGACCAGGT TCTCTTCAAT GGGGGCTCTA CTGATAGTAT TGTGCTAGAG  TACAGCAGGA ACCGAGCCAG GTTCAATGGC GATTTCGCCG CTGCCATGAT TAGGATGGGT GACATCCAAC CATTAACCGG TTCTGCTGGG CAAATCAGGA GGATATGTGG CGCCGTCAAC 
AACTGA 

Retrieve as FASTA