Entry information : LuPrx131(Lus10024209|PACid:23175774)
Entry ID 12084
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx131(Lus10024209|PACid:23175774)
Name LuPrx131(Lus10024209|PACid:23175774)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx131
start..stop
S start..stop
RcPrx77 497 3e-179 13..333 5..323
RcPrx85 476 6e-171 16..333 5..320
GmPrx53 465 1e-166 11..333 8..323
MePrx109 464 3e-166 11..333 5..321
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 280750..281757 1008  
join(280750..281757)


exon

Literature and cross-references LuPrx131(Lus10024209|PACid:23175774)
DNA ref. Phytozome 12:   scaffold165 (280750..281757)
Protein sequence: LuPrx131(Lus10024209|PACid:23175774)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (301)
PWM (Da):   %s   36024.83 (32384.8) Transmb domain:   %s   o10-32i
PI (pH):   %s   7.68 (7.68) Peptide Signal:   %s   cut: 35 range:35-335
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASPPPPPPP LSLVFLTLLI LSFSLLLSTP LTQAQLSSNF YDSTCPTALS IIRSRIRTAV QRERRMAASL IRLHFHDCFV QGCDASILLD DTPSMTGEKT ARPNANSIRG YSVIDDAKSQ  VENQCPGIVS CADIVAVAAR DASEAVGGPT WTVNLGRRDS ASASRDTAQA GNLPGFNDPL DRMVQLFDNK GLSARDMVAL SGSHTIGQAR CVTFRGRIYS NGSDIDANFA STRRRQCPNS 
SDGNGDGNLA AMDLVTPNSF DNNYFRNLMQ RRGLLQSDQV LFSGGSTDGI VQEYSRNPRV FTSDFAAAMV RMGDIDPLTG SQGQVRRVCS VANAS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTC CTCCTCCTCC TCCTCCTCCT TTGTCTCTTG TTTTCCTTAC ATTACTGATC CTCTCATTCT CCCTTCTCCT TTCCACGCCA CTCACTCAAG CACAACTCTC ATCCAACTTC  TACGACTCCA CCTGCCCTAC CGCTCTCTCC ATAATCCGCT CACGTATCCG CACAGCTGTC CAGAGGGAGC GCCGCATGGC AGCCTCCCTC ATCAGGCTCC ATTTCCACGA CTGCTTTGTC  CAAGGCTGCG ACGCCTCCAT CCTCCTCGAC GACACTCCTT CCATGACCGG CGAGAAAACC GCCCGCCCAA ATGCCAACTC CATCCGTGGC TACTCTGTCA TTGACGATGC CAAGTCACAG  GTCGAAAACC AGTGCCCTGG CATCGTCTCT TGCGCCGACA TAGTCGCAGT GGCAGCCCGT GACGCATCGG AGGCAGTGGG CGGGCCCACG TGGACGGTCA ACCTCGGAAG GAGAGATTCG  GCGAGTGCCA GCAGGGACAC CGCGCAGGCC GGTAATCTGC CCGGTTTCAA CGACCCGTTG GACCGTATGG TACAACTGTT CGACAACAAA GGGTTGAGCG CACGTGACAT GGTGGCCCTG  TCTGGGTCCC ACACGATCGG ACAGGCGAGG TGCGTGACTT TCCGGGGGAG GATTTATAGT AACGGTTCGG ATATAGACGC TAACTTTGCG AGCACGAGGA GAAGGCAGTG TCCTAATTCT  TCTGATGGAA ATGGAGATGG CAATTTGGCG GCTATGGATT TGGTCACTCC CAACTCTTTC GATAATAACT ACTTCAGGAA TCTGATGCAA AGGAGGGGGC TTCTCCAATC TGATCAGGTG  CTTTTCAGCG GTGGGTCGAC TGACGGAATA GTGCAAGAGT ATAGTAGGAA CCCCAGAGTT TTCACCTCCG ATTTCGCGGC TGCTATGGTT CGGATGGGTG ATATTGACCC ATTGACTGGT 
TCTCAGGGCC AAGTTCGCAG AGTTTGCAGC GTAGCCAACG CTTCCTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTC CTCCTCCTCC TCCTCCTCCT TTGTCTCTTG TTTTCCTTAC ATTACTGATC CTCTCATTCT CCCTTCTCCT TTCCACGCCA CTCACTCAAG CACAACTCTC ATCCAACTTC  TACGACTCCA CCTGCCCTAC CGCTCTCTCC ATAATCCGCT CACGTATCCG CACAGCTGTC CAGAGGGAGC GCCGCATGGC AGCCTCCCTC ATCAGGCTCC ATTTCCACGA CTGCTTTGTC  CAAGGCTGCG ACGCCTCCAT CCTCCTCGAC GACACTCCTT CCATGACCGG CGAGAAAACC GCCCGCCCAA ATGCCAACTC CATCCGTGGC TACTCTGTCA TTGACGATGC CAAGTCACAG  GTCGAAAACC AGTGCCCTGG CATCGTCTCT TGCGCCGACA TAGTCGCAGT GGCAGCCCGT GACGCATCGG AGGCAGTGGG CGGGCCCACG TGGACGGTCA ACCTCGGAAG GAGAGATTCG  GCGAGTGCCA GCAGGGACAC CGCGCAGGCC GGTAATCTGC CCGGTTTCAA CGACCCGTTG GACCGTATGG TACAACTGTT CGACAACAAA GGGTTGAGCG CACGTGACAT GGTGGCCCTG  TCTGGGTCCC ACACGATCGG ACAGGCGAGG TGCGTGACTT TCCGGGGGAG GATTTATAGT AACGGTTCGG ATATAGACGC TAACTTTGCG AGCACGAGGA GAAGGCAGTG TCCTAATTCT  TCTGATGGAA ATGGAGATGG CAATTTGGCG GCTATGGATT TGGTCACTCC CAACTCTTTC GATAATAACT ACTTCAGGAA TCTGATGCAA AGGAGGGGGC TTCTCCAATC TGATCAGGTG  CTTTTCAGCG GTGGGTCGAC TGACGGAATA GTGCAAGAGT ATAGTAGGAA CCCCAGAGTT TTCACCTCCG ATTTCGCGGC TGCTATGGTT CGGATGGGTG ATATTGACCC ATTGACTGGT 
TCTCAGGGCC AAGTTCGCAG AGTTTGCAGC GTAGCCAACG CTTCCTGA 

Retrieve as FASTA