Entry information : AtrPrx09
Entry ID 1209
Creation 2008-06-19 (Christophe Dunand)
Last sequence changes 2008-06-19 (Christophe Dunand)
Sequence status partial
Reviewer Michele Oliva
Last annotation changes 2008-06-19 (Christophe Dunand)
Peroxidase information: AtrPrx09
Name AtrPrx09
Class Class III peroxidase     [Orthogroup: Prx006]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx09
start..stop
S start..stop
TcPrx18 576 0 1..334 2..329
AcoPrx21 576 0 2..334 4..332
NnPrx01 576 0 11..334 8..331
AfpPrx01 575 0 2..334 4..332
Literature and cross-references AtrPrx09
Literature dePamphilis,C., Carlson,J., Ma,H., Soltis,D., Soltis,P.,Oppenheimer,D., Frohlich,M., Doyle,J., Tanksley,S., Webb,M., Leebens-Mack,J., Landherr,L., Ilut,D. and Wall,K.
unpublished (2003)
mRNA ref. GenBank:   FD443036 [Fragment]
EST ref. GenBank:   FD439765 [5' end]   CK756795 [3' end]
Protein sequence: AtrPrx09
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335 (318)
PWM (Da):   %s   37635.18 (35835.2)  
PI (pH):   %s   8.02 (8.02) Peptide Signal:   %s   cut: 18 range:18-335
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GSFSLLFFTV FLSLVAASKL YNNGVSAEES ADTGLMMNYY TDSCPQAEHV IREQVKLLYK RHKNTAFSWL RNIFHDCAVQ SCDASLLLDS TRRSLSEKET DRSFGLRNFR YLDTIKEAVE  RECPGVVSCA DILVLSARDG IVALGGPYIP LKTGRRDGRR SRAEVLEEYL PDHNESISGV LAKFEAIGID TPGVVALLGA HSVGRTHCVK LVHRLYPEVD PALNPDHVEH MLHKCPDPIP 
NPKAVQYVRN DRGTPMILDN NYYRNVMEGK GLLQVDHQLY EDKRTRFFVK KMAKSQDYFF KEFARAITIL SENNPLTGTK GEIRAVCNVA NKHHL 

Retrieve as FASTA  
Remarks Partial sequence from 5 ESTs. Short 5’ end is missing. From early female flower buds. Assembly by PeroxiBase team