Entry information : LuPrxII02 (Lus10003373)
Entry ID 12120
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2015-03-23 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-12-26 (Achraf Jemmat)
Peroxidase information: LuPrxII02 (Lus10003373)
Name (synonym) LuPrxII02 (Lus10003373)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrxII02
start..stop
S start..stop
LuPrxII16 425 7e-154 1..230 1..228
PtrtrPrxII05 325 9e-115 1..230 1..218
PtPrxII05 325 1e-114 1..230 1..218
PtremPrxII05 320 9e-113 1..230 1..218
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6596..7288 693  
join(6596..7288)


exon

Literature and cross-references LuPrxII02 (Lus10003373)
DNA ref. Phytozome 11:   scaffold1068 (6596..7288)
Protein sequence: LuPrxII02 (Lus10003373)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   231
PWM (Da):   %s   24136.74  
PI (pH):   %s   7.19
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSLSVSRI FLASPTAVAA TTKSLLPSVT ISANLSPLTS PKLNLRFNRT NLAKRFSAKS VPSISASISV GDKLPEATLS YLDADNEVQT VTVSSLTAGK KAILFAVPGA FTPTCSQKHL 
PGFVEKASEL KSKGVDTIAC VSVNDVFVMK AWKENLGITD EGDVLLLSDG NLEFTKAIGC ELDLSDKPVG LGVRSRRYAL LAEDGVVKVL NLEEGGAFTS SGAEDMLKAL * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCT CTCTCTCAGT CTCCAGAATC TTCCTCGCCT CACCCACTGC CGTCGCCGCC ACCACCAAAT CTCTCCTCCC TTCTGTCACC ATCTCCGCCA ACCTCTCTCC TCTCACCTCC  CCCAAACTCA ATCTCCGATT CAACCGCACC AACCTAGCCA AACGATTCTC CGCCAAATCA GTTCCCTCAA TCTCCGCCTC GATCTCCGTC GGCGATAAGC TCCCCGAAGC CACGCTCTCC  TACCTGGACG CCGACAACGA GGTCCAGACC GTGACCGTCT CCTCCCTCAC AGCCGGCAAG AAGGCCATCC TCTTCGCCGT CCCCGGGGCG TTCACCCCGA CCTGCTCGCA GAAGCACCTC  CCAGGGTTTG TGGAGAAGGC TTCGGAGCTG AAATCGAAAG GAGTGGACAC GATCGCCTGC GTGTCGGTGA ACGATGTGTT CGTCATGAAG GCGTGGAAGG AGAATTTGGG GATTACGGAT  GAGGGTGATG TTTTGCTGCT CTCCGATGGG AATTTGGAGT TCACTAAGGC GATTGGTTGC GAGCTGGATC TGAGCGATAA GCCGGTGGGG CTTGGGGTTA GGTCTAGGAG GTATGCGTTG 
CTGGCGGAGG ACGGCGTCGT TAAGGTGCTG AATTTGGAGG AAGGCGGCGC GTTTACCTCC AGCGGAGCTG AGGATATGCT CAAGGCACTG TGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCT CTCTCTCAGT CTCCAGAATC TTCCTCGCCT CACCCACTGC CGTCGCCGCC ACCACCAAAT CTCTCCTCCC TTCTGTCACC ATCTCCGCCA ACCTCTCTCC TCTCACCTCC  CCCAAACTCA ATCTCCGATT CAACCGCACC AACCTAGCCA AACGATTCTC CGCCAAATCA GTTCCCTCAA TCTCCGCCTC GATCTCCGTC GGCGATAAGC TCCCCGAAGC CACGCTCTCC  TACCTGGACG CCGACAACGA GGTCCAGACC GTGACCGTCT CCTCCCTCAC AGCCGGCAAG AAGGCCATCC TCTTCGCCGT CCCCGGGGCG TTCACCCCGA CCTGCTCGCA GAAGCACCTC  CCAGGGTTTG TGGAGAAGGC TTCGGAGCTG AAATCGAAAG GAGTGGACAC GATCGCCTGC GTGTCGGTGA ACGATGTGTT CGTCATGAAG GCGTGGAAGG AGAATTTGGG GATTACGGAT  GAGGGTGATG TTTTGCTGCT CTCCGATGGG AATTTGGAGT TCACTAAGGC GATTGGTTGC GAGCTGGATC TGAGCGATAA GCCGGTGGGG CTTGGGGTTA GGTCTAGGAG GTATGCGTTG 
CTGGCGGAGG ACGGCGTCGT TAAGGTGCTG AATTTGGAGG AAGGCGGCGC GTTTACCTCC AGCGGAGCTG AGGATATGCT CAAGGCACTG TGA 

Retrieve as FASTA