Entry information : LuGPx19 (Lus10003421|PACid:23164879)
Entry ID 12126
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-02-09 (Christophe Dunand)
Peroxidase information: LuGPx19 (Lus10003421|PACid:23164879)
Name (synonym) LuGPx19 (Lus10003421|PACid:23164879)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuGPx19
start..stop
S start..stop
LuGPx140 457 2e-164 1..235 1..235
LuGPx211 358 1e-125 1..235 1..232
PtGPx01 344 4e-120 37..235 27..223
CclGPx01 333 1e-115 1..235 1..236
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 25551..25829 279 N° 2 25225..25301 77 N° 3 25056..25117 62 N° 4 24504..24622 119
N° 5 24254..24421 168 N° 6 22855..23166 312  
complement(join(22855..23166,24254..24421,24504..24622,25056..25117,25225..25301 ,25551..25829))


exon

Literature and cross-references LuGPx19 (Lus10003421|PACid:23164879)
DNA ref. Phytozome 11:   scaffold543 (25829..22855)
Protein sequence: LuGPx19 (Lus10003421|PACid:23164879)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339
PWM (Da):   %s   37219.04  
PI (pH):   %s   9.38
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSLMFAATLSSPSHMYIAERPSCYSPSQQSFGVSVASARSSLLFPSSKSGFLRHGLSLKSQNSAGLVRKNPSFRVFARAATEKSIHDFTVKDIDGKNVSLSKFKGKALLIVNVASRCGLTSSNYSELSHVYEKYKTGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDVDVNGPSTAPVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVVERYAPTTSPFQIEVWELWKAGRATEVIDSSLSLDNSHEALRCIKIRLLCVEENAANRPDMQTVVLILNSETSSVPFPQKPAFVVSAISKVSPTIERTCSVNEMSFSGILRKRETLK*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCTTCTTTAATGTTCGCTGCAACTCTCTCCTCTCCTTCGCACATGTACATCGCAGAAAGGCCAAGTTGTTATTCACCCAGCCAGCAGTCGTTTGGCGTTTCCGTCGCATCAGCA
AGGTCGTCGCTGCTCTTCCCCTCTTCAAAATCGGGGTTTCTGCGACATGGGTTGTCTTTAAAATCCCAGAATTCAGCTGGGCTTGTTCGAAAGAATCCTTCTTTCCGCGTTTTTGCCAGA
GCTGCCACCGAGAAATCAATCCACGACTTCACTGTAAAG
GTGCGGTTTTTTGAAGGCCTTGATTTCGAGTTTCTGTCTTTCCCTCTTTCATGTGTTCTACTGATGGGATCTACTATAAGC
TTCGTTTGGTAGGTGAATTTTTTTACTTTTTCCGCCCGGATGGGAAAGATAGATTTCAGAAGTGATTTTGGGAGCGGACTTTCCTGATGCTATATAACTTGAGAAGTATCTACCTGAATT
CATTGTAGCAGAAAAACCAATGACTGAAGGTTGCATTTCTGTGTGCAGGACATTGATGGTAAAAACGTGTCTCTTAGCAAATTCAAAGGCAAAGCTCTGTTGATTGTCAATGTTGCTTCC
AGATG
GTACTCTCTCGCCAATCCATATACATAACTGATGATTCATATCCAGCATCCATCTTTAAGGATTGAGCTTTACCTTTTCAATCCATTTTGCTGTCTTTTGATTGCAGTGGTTTGA
CATCTTCCAACTATTCAGAACTATCGCACGTTTATGAGAAGTACAAGACACAAG
GTCAGTCAGATTCCTAGAGATTTCTAGATTTCTTGGCATCTATATTTACATGTTTCCTAAGAAAGT
ATGAATGGAGGTTAGTTGAAGAATGTTGAGCTGAAGTTTAGAGAGGTTACGGAGGAAAGTCGAATAGAGTGATATGAGAGATTCCAAGTGGAATCGTGTTTCCCAAGCTACTTCAATGGA
AATTAAAATTTCCTAGGAGTCCTTGATATTCCTTTATTCAACTTTCCTTCCACGAACGATTTCAACCTCAACTCAATTTTTTCAACTATTCTCAATTCAACTTTCATAGAAAACATGATT
CTAGATACCAAACCTTATCTAAGTTCGCAGTCGGTATTCATCGTCAATAAGTTGTTATCATCCGTGAGTGTCAAGTTCGTGATGAATACAATTATGTAAATCATTCAGTTGGTTGGTAAT
ATTGCAGGATTTGAAATCCTAGCTTTCCCTTGCAATCAGTTTGGAGGGCAAGAGCCAGGATCGAACCCGGAGATCAAGCAGTTTGCTTGTACCAGATTCAAAGCTGAATTTCCTATATTT
GACAAC
GTAGGTAGATAGGATGTGGCTTTCATGGTTGGATAGTATCAGTCTTTAAGGAGAATTCGAACAACTTGTGTGGTGACTGCAGGTTGACGTGAATGGGCCGAGCACAGCACCAGT
TTACCAGTTTCTGAAGTCGAGTGCTGGGGGATTTTTAGGTGATTTGATCAAGTGGAACTTTGAGAAGTTCTTGGTGGACAAGAATGGTAAAGTTGTGGAACGGTATGCCCCGACGACATC
ACCTTTCCAAATCGAG
GTACATTTCTTTCCATCTTCCAGCCTTACGTTTAAGAGCTTCTTGCTTGACAATGCAAGAGATGAATGATGTTCTATCAGTTCATATTGCTCCAATGCCTTCTT
TTCTTAAATCTGTGCCATCATTAGTCTCGGGTGTCCATTAAATTGGCCTCTTTTACTTGTTTGCAGAAGGATATTCAGAAGCTGCTTGCCGCATAAAATCACATCAGATGTCCCAAGTCA
CAACTTAATTATACGTGTTTGTAAATTAATTTGTCCTAGACTGATTGGTTGTTGCAAGTAGTATGCATTTATCCGTTATGTGGTTGCTATTACTGAAGGGCGTGGTAGAAGTATGGTTAT
AAGGGTAGTGGTAAGAAGTTTTATGTCATGGAATGAACCAGGTATCAACCAAATATCAATATCCTTCGAAATTCACCCCGAGTACGTACAAACTCAAAGCCCCTATCTATTATTTGAAAT
AATCTGGAGGGGAAGGCTCACACCAATAAGATCATAGTGAAGCTAGCTTTCAAGAGTAACATCATGAATGGAAATAAAATGAGTGTCAAGATCCTAAAGATACATACTGGCCAAATGATA
CGCAACATGTACATTTGCTCGATACAAAATATCCCAATCCAATCGTGCTTCCCAAGCTACTTCAAGTGGAATCGTGTTTTCAAAGAAGGTTTTACAGTCACAAAATTTCCGATTTTGGGA
TGTCTATAGTATTGGACGGTGATCAAGTTGAGGGGAAGACGATTAGGATTGGTGGAACATAGTAAGTTGTACCCCTTTTAGATAAGCTAGAACAATGTTGTATTATTTCAACTTATAATT
CTTCTCTCCATTGTTTCTTTGTTGCCACGGATACATGTCATCAGAATATGCAATCTTCGGAAGGTTTTCAGTGAAGTCGGATGTCTTCAGCTTCGGGGTGATCCTGCTAGGAACGGTAAT
AGGAAAGAAGATCAATGGGTTCTCCCATGAAGATCCTTCTTCGAACTTGATTAGCCATGTAAGTTGGATTATAACAACAACTAACCACCTAAGCTGCTTCCTTCCTACTGTTACGGTAAA
AATTGTGGCAAGTTTTACCACAGGTGTGGGAGCTATGGAAGGCAGGCAGAGCCACAGAGGTGATCGATTCTTCGCTGTCACTTGACAACTCGCATGAGGCGCTGAGATGTATTAAAATCA
GACTGTTGTGCGTGGAAGAGAATGCAGCAAACCGGCCCGATATGCAGACCGTGGTTCTCATATTAAACAGTGAAACATCATCTGTCCCATTTCCTCAAAAACCTGCATTTGTTGTTTCCG
CGATATCCAAGGTATCGCCTACAATAGAACGAACATGCTCTGTAAATGAGATGTCATTTTCAGGGATCCTTAGAAAGAGAGAAACTTTGAAGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTCTTCTTTAATGTTCGCTGCAACTCTCTCCTCTCCTTCGCACATGTACATCGCAGAAAGGCCAAGTTGTTATTCACCCAGCCAGCAGTCGTTTGGCGTTTCCGTCGCATCAGCA
AGGTCGTCGCTGCTCTTCCCCTCTTCAAAATCGGGGTTTCTGCGACATGGGTTGTCTTTAAAATCCCAGAATTCAGCTGGGCTTGTTCGAAAGAATCCTTCTTTCCGCGTTTTTGCCAGA
GCTGCCACCGAGAAATCAATCCACGACTTCACTGTAAAG
GACATTGATGGTAAAAACGTGTCTCTTAGCAAATTCAAAGGCAAAGCTCTGTTGATTGTCAATGTTGCTTCCAGATGTGGT
TTGACATCTTCCAACTATTCAGAACTATCGCACGTTTATGAGAAGTACAAGACACAAG
GATTTGAAATCCTAGCTTTCCCTTGCAATCAGTTTGGAGGGCAAGAGCCAGGATCGAACCCG
GAGATCAAGCAGTTTGCTTGTACCAGATTCAAAGCTGAATTTCCTATATTTGACAAC
GTTGACGTGAATGGGCCGAGCACAGCACCAGTTTACCAGTTTCTGAAGTCGAGTGCTGGGGGA
TTTTTAGGTGATTTGATCAAGTGGAACTTTGAGAAGTTCTTGGTGGACAAGAATGGTAAAGTTGTGGAACGGTATGCCCCGACGACATCACCTTTCCAAATCGAG
GTGTGGGAGCTATGG
AAGGCAGGCAGAGCCACAGAGGTGATCGATTCTTCGCTGTCACTTGACAACTCGCATGAGGCGCTGAGATGTATTAAAATCAGACTGTTGTGCGTGGAAGAGAATGCAGCAAACCGGCCC
GATATGCAGACCGTGGTTCTCATATTAAACAGTGAAACATCATCTGTCCCATTTCCTCAAAAACCTGCATTTGTTGTTTCCGCGATATCCAAGGTATCGCCTACAATAGAACGAACATGC
TCTGTAAATGAGATGTCATTTTCAGGGATCCTTAGAAAGAGAGAAACTTTGAAGTAG

Retrieve as FASTA