Entry information : AtrPrx13
Entry ID 1213
Creation 2005-06-13 (Christophe Dunand)
Last sequence changes 2005-06-13 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2008-06-25 (Christophe Dunand)
Peroxidase information: AtrPrx13
Name AtrPrx13
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx13
start..stop
S start..stop
CroPrx70 82 4e-21 1..58 148..205
LjPrx49 80 5e-21 1..58 12..69
PvPrx10 82 7e-21 1..58 154..211
LcPrx01_other 81 8e-21 1..58 80..137
Literature and cross-references AtrPrx13
Literature dePamphilis,C., Carlson,J., Ma,H., Soltis,D., Soltis,P.,Oppenheimer,D., Frohlich,M., Doyle,J., Tanksley,S., Webb,M., Leebens-Mack,J., Landherr,L., Ilut,D. and Wall,K.
unpublished (2003)
EST ref. GenBank:   CV000668 [Fragment]
Protein sequence: AtrPrx13
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   68
PWM (Da):   %s   7060.79  
PI (pH):   %s   11.02
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

GRRDSKTASL SLANSDLAPG SFNLGQLISN FAKQGLNLKD LVVLSGAHTI GLARCVTFPR PNLIMTPT 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Large parts of 5' and 3' sequences are missing. Due the small fragment size, it is not possible to clearly conclude if this sequence represent a class III peroxidase or an ascorbate peroxidase. TBLASTN on NCBI suggests however that it is more likely a class III peroxidase. From early female flower buds