Entry information : CruPrx02
Entry ID 1216
Creation 2008-09-05 (Christophe Dunand)
Last sequence changes 2010-06-01 (Catherine Mathe)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-06-02 (Christophe Dunand)
Peroxidase information: CruPrx02
Name CruPrx02
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Cycadaceae Cycas
Organism Cycas rumphii    [TaxId: 58031 ]
Cellular localisation N/D
Tissue type Young leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CruPrx02
start..stop
S start..stop
CmichPrx19 489 2e-177 5..241 88..324
PtaPrx04 379 3e-133 5..240 137..368
CmichPrx14 376 1e-132 5..240 108..343
PgPrx31 371 1e-130 5..240 106..337
Literature and cross-references CruPrx02
Literature Brenner,E.D., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija ,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from a normalized Cycas ovule library unpublished (2003)
EST ref. GenBank:   EX929466 [3' end]   EX925152 [Fragment]
Protein sequence: CruPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   241
PWM (Da):   %s   26440.3  
PI (pH):   %s   4.78
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
WIQRDINMSL PGDGFDAVIR AKTAVEAQCP GVVSCADILS IVTRDLITLV GGPYYEVTKG RRDGLISQAS RVKGNLPESN MTLDELNALF ESKGFTEAEM VTLSGAHTVG FSHCKEFLNR  LYNYSTAYPI DPTMNPQYAE GLRRACPQVI LDPTVVAFND VLSPRIFDNV YYQNLLRGLG LLASDQILYT DIRTRGLVQA YASDQETFFQ AFVAAMEKLG SLGVxTGYEG EIRRRCDAFN 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. Frame:1[1-726] on contig. 5' sequence is missing.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGGATCCAAA GAGACATCAA TATGTCTCTA CCGGGGGACG GATTTGATGC AGTTATACGA GCAAAGACTG CCGTGGAAGC ACAGTGCCCG GGCGTTGTGT CTTGTGCAGA TATACTGTCC  ATAGTGACAA GAGATCTGAT TACTCTGGTT GGGGGGCCTT ACTACGAGGT AACGAAAGGC AGGAGAGATG GGCTGATTTC TCAGGCATCC AGGGTGAAGG GAAACCTTCC GGAAAGCAAC  ATGACTTTGG ATGAGCTGAA TGCGCTGTTT GAATCCAAGG GTTTCACTGA GGCAGAAATG GTCACTCTAT CTGGCGCCCA CACGGTGGGA TTCTCTCATT GCAAGGAGTT CCTGAACAGG  CTCTACAACT ACAGCACCGC ATATCCCATC GATCCTACCA TGAATCCACA ATATGCAGAG GGTTTGCGAC GGGCCTGTCC GCAGGTCATT CTGGACCCCA CTGTCGTGGC CTTCAACGAT  GTCCTGTCGC CGAGAATTTT CGATAATGTG TACTACCAAA ATTTGCTCAG AGGCCTTGGG CTGCTGGCGT CTGATCAGAT TCTTTATACG GACATACGCA CCAGGGGGCT TGTGCAAGCT  TATGCTTCCG ACCAAGAGAC TTTCTTTCAA GCATTCGTGG CGGCCATGGA GAAGCTGGGT AGCCTGGGTG TCAnAACTGG CTACGAGGGA GAGATCCGGC GGAGGTGTGA TGCTTTCAAT 
GGATAATATG CCAACCGGGC TTTTT 

Retrieve as FASTA