Entry information : LuPrx55(Lus10009899|PACid:23150132)
Entry ID 12166
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx55(Lus10009899|PACid:23150132)
Name LuPrx55(Lus10009899|PACid:23150132)
Class Class III peroxidase     [Orthogroup: Prx014]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx55
start..stop
S start..stop
LuPrx129 528 0 58..329 1..272
LuPrx56 396 3e-139 1..329 1..323
MePrx58 389 1e-136 6..329 16..328
MePrx28 384 9e-135 6..329 16..325
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 28715..29704 990  
join(28715..29704)


exon

Literature and cross-references LuPrx55(Lus10009899|PACid:23150132)
DNA ref. Phytozome 12:   scaffold200 (28715..29704)
Protein sequence: LuPrx55(Lus10009899|PACid:23150132)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (304)
PWM (Da):   %s   35831.18 (32986.7)  
PI (pH):   %s   8.78 (8.91) Peptide Signal:   %s   cut: 26 range:26-329
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSLTAVYLL ITLILLTSTL QHCQSLDLSP QFYSQKCPRA LTAIRSTVQA AITKDRRMAA SLIRLQFHDC FAHGCDASVL LDQTGTSTQT EKAAIPNRRF AKTFQVIEDA KSSLEKMCPG  VVSCADIIAV AARDASAAVE GPAWDVKLGR RDSNAAFLSE ANSDIPGPKD DLPTLIAEFQ KKGLTAREMV VLSGAHTLGF AQCFTFRDRI YDSNGTNAAV NKIIDPDFAR KKRKACPAQG 
GDRFLAPLDV VTPKSFDNNY FKTLMKKKGL LESDQALYSG GSTDQIVEEY SRDGNKFSMD FAAAMVKMGD IGVMTGNNGQ IRKVCRRAN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCATCAC TAACTGCAGT TTATCTGCTC ATTACGCTGA TACTACTGAC CTCAACGCTA CAACATTGCC AATCATTAGA CCTCTCCCCA CAATTCTACT CCCAAAAATG CCCTCGAGCA  CTCACAGCCA TCCGATCCAC CGTCCAGGCC GCTATCACAA AGGACCGTAG GATGGCTGCG TCGTTAATCC GCCTCCAATT CCACGACTGC TTCGCCCACG GCTGCGACGC TTCCGTCCTA  CTCGACCAAA CCGGAACCTC CACCCAAACC GAGAAAGCCG CCATCCCGAA TCGAAGATTC GCGAAAACCT TCCAGGTCAT CGAGGACGCT AAATCCAGCC TGGAAAAGAT GTGCCCCGGC  GTCGTATCTT GCGCCGACAT TATCGCTGTC GCCGCTAGAG ACGCCTCTGC CGCCGTGGAG GGACCCGCCT GGGATGTGAA GCTGGGGCGG CGAGATTCGA ACGCGGCATT TCTATCGGAA  GCGAATTCGG ACATTCCCGG GCCTAAAGAC GACCTCCCGA CGCTGATTGC CGAGTTCCAG AAAAAGGGGC TCACCGCCAG GGAAATGGTT GTCTTATCGG GAGCTCATAC GTTGGGATTC  GCACAGTGCT TTACGTTCCG CGACAGGATC TACGATTCTA ACGGGACGAA TGCGGCGGTG AACAAAATTA TCGATCCCGA TTTTGCTAGG AAGAAGAGGA AGGCTTGCCC GGCGCAGGGC  GGAGACAGGT TCCTCGCGCC GCTTGATGTG GTGACGCCCA AGTCGTTTGA TAATAACTAT TTCAAGACGC TGATGAAGAA GAAGGGGCTA TTGGAGTCCG ATCAGGCTCT TTATAGCGGC  GGCTCCACGG ATCAGATTGT TGAGGAGTAC AGTAGGGACG GGAACAAGTT TAGTATGGAT TTCGCGGCGG CGATGGTTAA GATGGGTGAT ATCGGAGTGA TGACCGGTAA TAATGGTCAG 
ATTAGGAAGG TTTGCAGGAG GGCCAATTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCATCAC TAACTGCAGT TTATCTGCTC ATTACGCTGA TACTACTGAC CTCAACGCTA CAACATTGCC AATCATTAGA CCTCTCCCCA CAATTCTACT CCCAAAAATG CCCTCGAGCA  CTCACAGCCA TCCGATCCAC CGTCCAGGCC GCTATCACAA AGGACCGTAG GATGGCTGCG TCGTTAATCC GCCTCCAATT CCACGACTGC TTCGCCCACG GCTGCGACGC TTCCGTCCTA  CTCGACCAAA CCGGAACCTC CACCCAAACC GAGAAAGCCG CCATCCCGAA TCGAAGATTC GCGAAAACCT TCCAGGTCAT CGAGGACGCT AAATCCAGCC TGGAAAAGAT GTGCCCCGGC  GTCGTATCTT GCGCCGACAT TATCGCTGTC GCCGCTAGAG ACGCCTCTGC CGCCGTGGAG GGACCCGCCT GGGATGTGAA GCTGGGGCGG CGAGATTCGA ACGCGGCATT TCTATCGGAA  GCGAATTCGG ACATTCCCGG GCCTAAAGAC GACCTCCCGA CGCTGATTGC CGAGTTCCAG AAAAAGGGGC TCACCGCCAG GGAAATGGTT GTCTTATCGG GAGCTCATAC GTTGGGATTC  GCACAGTGCT TTACGTTCCG CGACAGGATC TACGATTCTA ACGGGACGAA TGCGGCGGTG AACAAAATTA TCGATCCCGA TTTTGCTAGG AAGAAGAGGA AGGCTTGCCC GGCGCAGGGC  GGAGACAGGT TCCTCGCGCC GCTTGATGTG GTGACGCCCA AGTCGTTTGA TAATAACTAT TTCAAGACGC TGATGAAGAA GAAGGGGCTA TTGGAGTCCG ATCAGGCTCT TTATAGCGGC  GGCTCCACGG ATCAGATTGT TGAGGAGTAC AGTAGGGACG GGAACAAGTT TAGTATGGAT TTCGCGGCGG CGATGGTTAA GATGGGTGAT ATCGGAGTGA TGACCGGTAA TAATGGTCAG 
ATTAGGAAGG TTTGCAGGAG GGCCAATTAA 

Retrieve as FASTA