Entry information : LuPrx56(Lus10009900|PACid:23150082)
Entry ID 12167
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx56(Lus10009900|PACid:23150082)
Name LuPrx56(Lus10009900|PACid:23150082)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx56
start..stop
S start..stop
LuPrx58 572 0 7..324 4..319
LuPrx54 563 0 8..324 4..322
LuPrx130 560 0 11..324 9..321
EcamPrx144 483 5e-174 13..323 1..306
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 35988..36962 975  
complement(join(35988..36962))


exon

Literature and cross-references LuPrx56(Lus10009900|PACid:23150082)
DNA ref. Phytozome 11:   scaffold200 (36962..35988)
Protein sequence: LuPrx56(Lus10009900|PACid:23150082)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (298)
PWM (Da):   %s   35197.78 (32299.2)  
PI (pH):   %s   7.98 (7.25) Peptide Signal:   %s   cut: 27 range:27-324
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASFTISASF LVLLVLMSMT IKLSRAQQLS TNFYANTCPN ALSTIRTSIR TSIARERRMA ASLLRLHFHD CFVQGCDASI LLDKSPTIIQ SEKTAPPNGK SVRGYEVIDA AKAQVERICP  GVVSCADIIA VAARDASAYV GGPSWDVKLG RRDSTSAFPD LSLTDLPFFK EDLQTLIDRF QGKGLSPRDM VALSGAHTLG QAQCFTFRDR IYSNGTDIDA GFASTRRRRC PVEGGDETLA 
PLDLVTPNSF DNNYFRDLMQ RKGLLVTDQE LFSGGSTDSI VVEYSRSPAR FSADFAAAMV KMGDIQPLTG SAGEIRRICG SVNS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAGCT TCACTATATC AGCATCTTTC CTAGTGCTGT TGGTTCTGAT GAGCATGACG ATAAAGCTGT CTCGAGCACA GCAGCTATCC ACAAACTTCT ACGCCAACAC ATGTCCCAAT  GCCCTATCAA CAATCAGGAC ATCCATCAGG ACGTCCATCG CCAGAGAACG AAGAATGGCT GCGTCGCTCC TCCGTCTCCA CTTCCACGAC TGCTTCGTCC AAGGATGCGA CGCTTCGATA  TTGCTGGACA AATCCCCAAC CATTATCCAG TCCGAGAAAA CCGCACCCCC AAATGGCAAA TCTGTCCGGG GCTACGAAGT CATCGACGCT GCCAAAGCCC AAGTCGAGAG GATATGCCCT  GGCGTCGTCT CGTGCGCAGA CATCATCGCT GTCGCTGCCA GGGACGCCTC TGCCTATGTG GGAGGCCCAT CGTGGGACGT GAAGCTCGGC AGAAGAGATT CGACTTCTGC TTTCCCCGAT  TTGTCCCTTA CTGACTTGCC GTTTTTCAAA GAGGACCTTC AGACACTTAT CGACCGGTTT CAGGGGAAAG GGCTTAGTCC TAGAGACATG GTTGCGCTCT CTGGCGCTCA TACTTTGGGA  CAAGCTCAAT GCTTCACCTT TCGCGATAGG ATTTATAGCA ATGGTACAGA CATTGATGCT GGATTCGCTA GCACAAGAAG ACGTAGATGT CCGGTTGAAG GAGGAGACGA GACATTGGCA  CCTTTGGATC TCGTAACGCC CAACTCCTTT GATAATAACT ACTTCAGGGA TCTGATGCAG AGGAAGGGAC TCCTTGTTAC GGACCAGGAA CTCTTCAGCG GGGGCTCTAC GGATAGCATT  GTGGTCGAAT ACAGTAGGAG TCCTGCTCGA TTCAGTGCTG ATTTCGCTGC GGCGATGGTC AAGATGGGTG ACATCCAGCC ATTGACAGGC TCGGCTGGGG AAATCAGAAG GATATGTGGA 
TCCGTTAACA GTTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAGCT TCACTATATC AGCATCTTTC CTAGTGCTGT TGGTTCTGAT GAGCATGACG ATAAAGCTGT CTCGAGCACA GCAGCTATCC ACAAACTTCT ACGCCAACAC ATGTCCCAAT  GCCCTATCAA CAATCAGGAC ATCCATCAGG ACGTCCATCG CCAGAGAACG AAGAATGGCT GCGTCGCTCC TCCGTCTCCA CTTCCACGAC TGCTTCGTCC AAGGATGCGA CGCTTCGATA  TTGCTGGACA AATCCCCAAC CATTATCCAG TCCGAGAAAA CCGCACCCCC AAATGGCAAA TCTGTCCGGG GCTACGAAGT CATCGACGCT GCCAAAGCCC AAGTCGAGAG GATATGCCCT  GGCGTCGTCT CGTGCGCAGA CATCATCGCT GTCGCTGCCA GGGACGCCTC TGCCTATGTG GGAGGCCCAT CGTGGGACGT GAAGCTCGGC AGAAGAGATT CGACTTCTGC TTTCCCCGAT  TTGTCCCTTA CTGACTTGCC GTTTTTCAAA GAGGACCTTC AGACACTTAT CGACCGGTTT CAGGGGAAAG GGCTTAGTCC TAGAGACATG GTTGCGCTCT CTGGCGCTCA TACTTTGGGA  CAAGCTCAAT GCTTCACCTT TCGCGATAGG ATTTATAGCA ATGGTACAGA CATTGATGCT GGATTCGCTA GCACAAGAAG ACGTAGATGT CCGGTTGAAG GAGGAGACGA GACATTGGCA  CCTTTGGATC TCGTAACGCC CAACTCCTTT GATAATAACT ACTTCAGGGA TCTGATGCAG AGGAAGGGAC TCCTTGTTAC GGACCAGGAA CTCTTCAGCG GGGGCTCTAC GGATAGCATT  GTGGTCGAAT ACAGTAGGAG TCCTGCTCGA TTCAGTGCTG ATTTCGCTGC GGCGATGGTC AAGATGGGTG ACATCCAGCC ATTGACAGGC TCGGCTGGGG AAATCAGAAG GATATGTGGA 
TCCGTTAACA GTTGA 

Retrieve as FASTA