Entry information : LuPrx58(Lus10009902|PACid:23150093)
Entry ID 12169
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx58(Lus10009902|PACid:23150093)
Name LuPrx58(Lus10009902|PACid:23150093)
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx58
start..stop
S start..stop
LuPrx130 614 0 1..319 1..321
LuPrx54 610 0 1..319 1..322
LuPrx56 572 0 4..319 7..324
EcamPrx144 488 3e-176 10..318 1..306
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 41680..42639 960  
complement(join(41680..42639))


exon

Literature and cross-references LuPrx58(Lus10009902|PACid:23150093)
DNA ref. Phytozome 12:   scaffold200 (42639..41680)
Protein sequence: LuPrx58(Lus10009902|PACid:23150093)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (296)
PWM (Da):   %s   34724.51 (32135.1)  
PI (pH):   %s   7.64 (7.68) Peptide Signal:   %s   cut: 24 range:24-319
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKSSFWALI LVLLCIAISQ SEAQLSTNFY ANSCPNALST IRRSITTAIS RERRMAASLL RLHFHDCFVQ GCDASILLDQ SPTIESEKTA APNDKSARGY EVIDAAKAQV ERICPGVVSC  ADIIAVAARD ASAYVGGPSW NVKLGRRDST SAFPDLALTD LPFFKEDLQS LIDRFQGKGL SPRDMVALSG AHTLGQAQCF TFRDRIYSNG TDIDAGFAST RRRRCPVEGG DETLAPLDLV 
TPNSFDNNYF RDLVQRKGLL VTDQVLFNGG STDSIVVEYS RNRARFNADF AAAMIRMGDI QPLTGSAGQI RRICGAINN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAAT CATCATTTTG GGCACTGATA CTCGTGTTGC TGTGTATTGC AATAAGCCAG TCCGAAGCAC AACTGTCCAC AAACTTCTAC GCCAATTCAT GCCCCAACGC TCTCTCTACC  ATAAGGAGAT CCATCACCAC AGCCATCTCG AGGGAGCGAA GAATGGCCGC GTCTCTACTC CGTCTCCATT TCCACGACTG CTTCGTCCAA GGATGCGACG CTTCCATATT GCTGGACCAA  TCACCCACCA TTGAATCCGA GAAAACCGCT GCCCCGAATG ACAAATCAGC TCGAGGGTAC GAAGTCATTG ACGCTGCCAA GGCCCAAGTG GAGAGGATAT GCCCTGGAGT TGTGTCCTGT  GCGGACATTA TCGCAGTTGC TGCCAGAGAT GCCTCTGCAT ATGTAGGAGG CCCCTCTTGG AATGTGAAGC TTGGCAGAAG AGATTCGACT TCAGCTTTCC CTGATTTGGC TCTTACAGAC  TTGCCGTTCT TCAAAGAGGA CCTTCAATCT CTTATCGACC GGTTTCAGGG GAAAGGGCTT AGTCCTAGAG ACATGGTCGC GCTCTCTGGC GCTCATACTC TGGGACAAGC TCAATGCTTC  ACATTTCGCG ATAGGATTTA TAGCAATGGT ACCGACATTG ATGCTGGATT CGCTAGCACA CGAAGACGTA GATGCCCGGT CGAAGGCGGG GACGAGACAT TGGCGCCGTT AGATTTGGTG  ACGCCCAACT CCTTTGATAA TAACTACTTC AGGGATCTTG TGCAGAGGAA GGGACTCCTT GTAACGGACC AGGTTCTCTT CAATGGGGGC TCTACTGATA GCATTGTGGT GGAGTATAGT  AGGAATCGAG CCAGGTTCAA TGCCGATTTC GCAGCTGCCA TGATTCGGAT GGGTGACATC CAGCCGTTGA CCGGTTCTGC TGGGCAAATC AGGAGGATAT GTGGTGCCAT CAACAACTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAAT CATCATTTTG GGCACTGATA CTCGTGTTGC TGTGTATTGC AATAAGCCAG TCCGAAGCAC AACTGTCCAC AAACTTCTAC GCCAATTCAT GCCCCAACGC TCTCTCTACC  ATAAGGAGAT CCATCACCAC AGCCATCTCG AGGGAGCGAA GAATGGCCGC GTCTCTACTC CGTCTCCATT TCCACGACTG CTTCGTCCAA GGATGCGACG CTTCCATATT GCTGGACCAA  TCACCCACCA TTGAATCCGA GAAAACCGCT GCCCCGAATG ACAAATCAGC TCGAGGGTAC GAAGTCATTG ACGCTGCCAA GGCCCAAGTG GAGAGGATAT GCCCTGGAGT TGTGTCCTGT  GCGGACATTA TCGCAGTTGC TGCCAGAGAT GCCTCTGCAT ATGTAGGAGG CCCCTCTTGG AATGTGAAGC TTGGCAGAAG AGATTCGACT TCAGCTTTCC CTGATTTGGC TCTTACAGAC  TTGCCGTTCT TCAAAGAGGA CCTTCAATCT CTTATCGACC GGTTTCAGGG GAAAGGGCTT AGTCCTAGAG ACATGGTCGC GCTCTCTGGC GCTCATACTC TGGGACAAGC TCAATGCTTC  ACATTTCGCG ATAGGATTTA TAGCAATGGT ACCGACATTG ATGCTGGATT CGCTAGCACA CGAAGACGTA GATGCCCGGT CGAAGGCGGG GACGAGACAT TGGCGCCGTT AGATTTGGTG  ACGCCCAACT CCTTTGATAA TAACTACTTC AGGGATCTTG TGCAGAGGAA GGGACTCCTT GTAACGGACC AGGTTCTCTT CAATGGGGGC TCTACTGATA GCATTGTGGT GGAGTATAGT  AGGAATCGAG CCAGGTTCAA TGCCGATTTC GCAGCTGCCA TGATTCGGAT GGGTGACATC CAGCCGTTGA CCGGTTCTGC TGGGCAAATC AGGAGGATAT GTGGTGCCAT CAACAACTGA 

Retrieve as FASTA