Entry information : CruPrx03
Entry ID 1217
Creation 2008-09-05 (Christophe Dunand)
Last sequence changes 2010-06-03 (Catherine Mathe)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-06-04 (Christophe Dunand)
Peroxidase information: CruPrx03
Name CruPrx03
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Cycadaceae Cycas
Organism Cycas rumphii    [TaxId: 58031 ]
Cellular localisation N/D
Tissue type Young leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CruPrx03
start..stop
S start..stop
CmichPrx09 461 2e-166 1..227 1..227
GbPrx50 322 4e-111 1..223 1..223
CmichPrx12 311 5e-107 7..225 13..223
GbPrx20 309 3e-106 1..221 1..220
Literature and cross-references CruPrx03
Literature Brenner,E.D., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija ,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. unpublished (2003)
EST ref. GenBank:   CB092730   CB092965.1 [5' end]
Protein sequence: CruPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   226 (206)
PWM (Da):   %s   23718.93 (21642.9) Transmb domain:   %s   i7-26o
PI (pH):   %s   4.92 (4.74) Peptide Signal:   %s   cut: 21 range:21-226
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNHYATILLA LFVCVSAASA VGFSGVKDVN DLPSPV*GLS WTFYNESCPN LESIVKARIK VYLSQNITDA AGLLRLHFHD CFVQGCDASV LLAGSGDEQE DTPNLTLRPK AFQIINDIKQ 
AVEANCSGVV SCADIVTLAA RESVAQTGGP EYPVPLGRRD SLQFANATVT LANLPAPTSN VTGLTAVFSN KGLNLTDLVA LSGGHTIGFA HCASFTNRLY DSEGNVS 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs (CB092730 and CB092774). Stop in frame after peptide signal. 3' sequence is missing. Frame:1[19-699] on contig.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CnTGGGCGGA TTGGCAGATA AGATGAATCA CTACGCCACC ATACTTTTGG CTCTATTTGT ATGCGTGTCG GCAGCCTCTG CTGTTGGGTT TAGTGGTGTG AAGGATGTGA ATGATCTGCC  AAGCCCCGTG TAAGGACTGT CGTGGACATT CTACAACGAG AGCTGCCCGA ACTTGGAATC CATAGTGAAG GCGCGTATCA AGGTGTATTT GAGTCAAAAC ATCACCGACG CAGCGGGATT  GTTGAGACTT CACTTTCACG ACTGCTTCGT CCAGGGTTGC GACGCATCGG TGTTGCTTGC CGGGTCGGGA GACGAGCAGG AGGACACCCC AAACTTGACA TTGAGACCCA AAGCATTCCA  AATTATCAAT GACATCAAAC AGGCAGTTGA AGCCAACTGC AGTGGCGTTG TATCCTGCGC TGATATCGTG ACATTAGCTG CTCGCGAATC CGTCGCGCAG ACCGGAGGAC CCGAGTATCC  TGTACCTCTC GGCCGTAGAG ACAGCCTTCA GTTTGCAAAC GCCACAGTGA CTCTTGCTAA TTTACCTGCG CCAACATCCA ACGTCACGGG ACTGACGGCC GTTTTCTCTA ATAAGGGACT 
TAATTTGACG GATCTTGTCG CGCTCTCAGG AGGACACACC ATTGGCTTTG CGCACTGCGC ATCGTTCACT AACCGACTGT ACGACAGCGA GGGGAACGTA TCG 

Retrieve as FASTA