Entry information : CruPrx05
Entry ID 1219
Creation 2008-09-05 (Christophe Dunand)
Last sequence changes 2008-09-05 (Christophe Dunand)
Sequence status partial
Reviewer Catherine Mathe
Last annotation changes 2010-06-03 (Catherine Mathe)
Peroxidase information: CruPrx05
Name CruPrx05
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Cycadaceae Cycas
Organism Cycas rumphii    [TaxId: 58031 ]
Cellular localisation N/D
Tissue types Ovule
Sporophyll
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CruPrx05
start..stop
S start..stop
CmichPrx05 479 4e-172 1..319 8..326
CruPrx09 464 1e-166 25..319 2..296
PgPrx04 464 4e-166 7..320 10..323
PabPrx42 462 1e-165 7..319 10..322
Literature and cross-references CruPrx05
Literature Brenner,E.D., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija ,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. Expressed tag sequences from Cycas sporophyll (w/o ovule). unpublished (2003)
EST ref. GenBank:   EX919235.1 [5' end]   EX809224.1 [Fragment]
Protein sequence: CruPrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (294)
PWM (Da):   %s   34098.41 (31376.9) Transmb domain:   %s   i2-24o
PI (pH):   %s   5.72 (6.05) Peptide Signal:   %s   cut: 27 range:27-320
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNIVIITIVG LIVVSMLEFA VIPANAEGTV VGFYSKSCPD AEKLVQLHVQ RKFRSDKTIA AALLRMHFHD CFVQGCDASI LVDSTPGNRA EKEAGPNQSV RGYEFIDEIK KDLEAVCPKN  VSCADIIALA TRDAVALAGG PRYDVPTGRR DGTRSREADG ETLPSPTDSV REAAGAFARK GLSVLDLVTL LGAHTLGVTH CSFVSDRLYN FEGTGSPDPA MDPTLVTKLK KVCPNPSSGS 
TRDSPVPLDQ GTPLKFDSSF YIEVAAGRAI LPIDQELSED RSTNGTVSSY AGLRSARPLS FNSQFVESII KMGNLGVLTG 

Retrieve as FASTA  
Remarks Partial sequence from 7 ESTs. Short 3' end is missing. Frame:1[73-1035] on contig.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TCGTAATATT GTTCTGCATC ATCGACGCCA TTGGAATAAA GTTGGAAGAT CGTGGATTCG CATATTGCAG AGATGAATAT CGTAATTATT ACCATCGTCG GGTTAATTGT CGTGTCCATG  CTCGAGTTTG CGGTGATTCC TGCCAATGCA GAAGGCACAG TGGTAGGATT TTACAGCAAG AGTTGCCCGG ATGCAGAGAA GCTCGTGCAG TTGCATGTAC AGAGAAAATT CAGGTCCGAT  AAGACGATCG CCGCTGCTCT TCTTCGCATG CATTTTCACG ACTGCTTCGT CCAAGGATGT GATGCTTCGA TTCTGGTAGA CTCGACTCCA GGAAATCGAG CAGAGAAAGA GGCGGGACCC  AATCAAAGCG TGAGAGGATA CGAGTTTATT GACGAGATAA AGAAGGACTT GGAAGCCGTG TGTCCCAAGA ACGTCTCCTG TGCCGACATT ATTGCTCTGG CTACGCGGGA CGCTGTGGCT  CTGGCAGGCG GTCCCCGTTA CGATGTTCCA ACGGGAAGAA GGGACGGTAC TCGATCCAGA GAAGCAGACG GCGAAACCCT TCCGAGTCCC ACCGACAGCG TTAGAGAGGC GGCCGGAGCC  TTTGCTCGGA AGGGTCTATC GGTTCTGGAC TTAGTGACTC TATTAGGTGC CCACACGTTG GGCGTTACAC ATTGCAGTTT CGTTAGCGAT AGACTCTACA ATTTCGAAGG CACGGGCAGT  CCGGACCCTG CCATGGATCC GACCTTAGTC ACCAAGTTAA AGAAAGTCTG TCCGAACCCA TCTTCGGGAA ACACGCGGGA TTCACCCGTC CCGTTGGATC AAGGAACCCC GTTAAAATTT  GATTCCAGTT TCTACATAGA GGTCGCGGCT GGACGGGCCA TCCTACCCAT CGATCAGGAG CTATCTGAGG ATAGAAGCAC CAACGGCACC GTGAGTAGCT ATGCCGGATT AAGATCTGCG 
CGTCCATTGA GTTTTAACAG TCAGTTCGTT GAGTCCATCA TCAAAATGGG TAACTTGGGC GTGCTGACTG GTT 

Retrieve as FASTA