Entry information : LuPrxII16(Lus10002843|PACid:23181324)
Entry ID 12193
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrxII16(Lus10002843|PACid:23181324)
Name LuPrxII16(Lus10002843|PACid:23181324)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrxII16
start..stop
S start..stop
LuPrxII02 425 7e-154 1..228 1..230
PtrtrPrxII05 327 2e-115 1..228 1..218
PtPrxII05 326 4e-115 1..228 1..218
PtremPrxII05 321 6e-113 1..228 1..218
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 26105..26791 687  
join(26105..26791)


exon

Literature and cross-references LuPrxII16(Lus10002843|PACid:23181324)
DNA ref. Phytozome 11:   scaffold97 (26105..26791)
Protein sequence: LuPrxII16(Lus10002843|PACid:23181324)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   229
PWM (Da):   %s   24036.68  
PI (pH):   %s   7.19
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSLSVSRI LLSSPTTVAA TTKSLLPSIA ISANLTPFSS PKLNLRFNRT KLSKRFSAVP SISASISEGD RLPDATLSYL DADNEVQTVT VSSLTAGKKA ILFAVPGAFT PTCSQKHLPG 
FVEKAAELKS KGVDTIACVS VNDVFVMKAW KENLGIKDEG DVLLLSDGNL EFTKAIGCEL DLSDKPVGLG VRSRRYALLA EDGVVKVLNL EEGGAFTSSG AEDMLKAL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCT CTCTCTCTGT CTCCAGAATC CTCCTCTCCT CACCCACCAC CGTCGCCGCC ACCACCAAAT CTCTCCTCCC TTCCATCGCA ATCTCCGCCA ACCTCACTCC CTTCTCCTCC  CCCAAACTCA ATCTCCGATT CAACCGCACC AAACTCTCCA AACGATTCTC CGCCGTTCCC TCAATCTCCG CCTCGATCTC CGAAGGAGAT CGCCTCCCCG ACGCCACGCT ATCCTACCTA  GACGCCGACA ACGAGGTCCA GACCGTGACT GTCTCCTCCC TCACTGCCGG CAAGAAGGCC ATCCTCTTCG CCGTCCCGGG GGCGTTCACC CCGACCTGCT CGCAGAAGCA CCTCCCGGGG  TTCGTGGAGA AGGCTGCGGA GCTGAAATCG AAAGGAGTGG ACACGATCGC CTGCGTGTCG GTGAACGATG TGTTCGTGAT GAAGGCGTGG AAGGAGAATT TGGGGATTAA GGATGAAGGT  GATGTTTTGC TGCTCTCCGA TGGGAATCTG GAGTTCACTA AGGCGATTGG GTGCGAGCTG GATCTGAGCG ATAAGCCGGT GGGGCTTGGG GTTAGGTCTA GGAGGTATGC GTTGCTGGCG 
GAGGACGGCG TCGTTAAGGT GCTGAATTTG GAGGAAGGCG GCGCGTTTAC TTCAAGCGGG GCTGAGGATA TGCTCAAGGC ACTGTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCT CTCTCTCTGT CTCCAGAATC CTCCTCTCCT CACCCACCAC CGTCGCCGCC ACCACCAAAT CTCTCCTCCC TTCCATCGCA ATCTCCGCCA ACCTCACTCC CTTCTCCTCC  CCCAAACTCA ATCTCCGATT CAACCGCACC AAACTCTCCA AACGATTCTC CGCCGTTCCC TCAATCTCCG CCTCGATCTC CGAAGGAGAT CGCCTCCCCG ACGCCACGCT ATCCTACCTA  GACGCCGACA ACGAGGTCCA GACCGTGACT GTCTCCTCCC TCACTGCCGG CAAGAAGGCC ATCCTCTTCG CCGTCCCGGG GGCGTTCACC CCGACCTGCT CGCAGAAGCA CCTCCCGGGG  TTCGTGGAGA AGGCTGCGGA GCTGAAATCG AAAGGAGTGG ACACGATCGC CTGCGTGTCG GTGAACGATG TGTTCGTGAT GAAGGCGTGG AAGGAGAATT TGGGGATTAA GGATGAAGGT  GATGTTTTGC TGCTCTCCGA TGGGAATCTG GAGTTCACTA AGGCGATTGG GTGCGAGCTG GATCTGAGCG ATAAGCCGGT GGGGCTTGGG GTTAGGTCTA GGAGGTATGC GTTGCTGGCG 
GAGGACGGCG TCGTTAAGGT GCTGAATTTG GAGGAAGGCG GCGCGTTTAC TTCAAGCGGG GCTGAGGATA TGCTCAAGGC ACTGTGA 

Retrieve as FASTA