Entry information : CruPrx06
Entry ID 1220
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2005-06-21 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2010-06-03 (Catherine Mathe)
Peroxidase information: CruPrx06
Name CruPrx06
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Cycadaceae Cycas
Organism Cycas rumphii    [TaxId: 58031 ]
Cellular localisation N/D
Tissue type Young leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CruPrx06
start..stop
S start..stop
CmichPrx07 246 3e-83 1..127 235..361
CmichPrx23 219 1e-74 1..126 88..213
GbPrx03 171 7e-54 1..127 238..363
ZfuPrx02 154 6e-50 2..115 1..114
Literature and cross-references CruPrx06
Literature Brenner,E.D., Katari,M.S., Dedhia,N.N., O'Shaughnessy,A.L., Balija ,V., Martienssen,R.A., McCombie,R.W., Benfey,P., Coruzzi,G. and Stevenson,D. unpublished (2003)
EST ref. GenBank:   CB090059
Protein sequence: CruPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   127
PWM (Da):   %s   13903.06  
PI (pH):   %s   8.7
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AKSLYRTCPT DSTDNKTVLD IRSPNVFDNK YYVDLLQGQG LFTSDQTLFL DDSRTKKIVQ SFASNQALFF QKFARAMIKM GQLNVLTGKQ GEIRNICSAT NPTRASSTLG SVADDVKIYG 
DEVVSAM 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Large 5' fragment is missing. Frame:-1[1-384] on contig.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCGAAGAGTC TGTATAGAAC GTGCCCTACC GATAGCACCG ATAACAAAAC CGTGTTGGAC ATTCGCAGCC CCAATGTGTT CGATAACAAG TACTACGTAG ATCTGTTGCA GGGCCAGGGG  TTGTTCACAT CTGATCAGAC GCTCTTCTTG GACGACTCTC GAACTAAAAA GATCGTGCAG AGTTTCGCAT CCAACCAAGC GCTGTTTTTC CAGAAATTTG CGAGGGCAAT GATAAAGATG  GGCCAACTGA ATGTCCTGAC GGGGAAACAA GGAGAGATTC GAAACATTTG CTCTGCAACA AATCCAACAC GAGCTTCGTC GACGCTTGGA AGCGTTGCAG ACGATGTAAA GATCTATGGC  GACGAAGTAG TGTCGGCCAT GTGAACTGAG ATAGTTTATA TGTCTCCCTT TTTTATGTGG ACTGCACAGT TTGATGTTTC AAATAAAGTA CGTTGTGTCC CCACTAAAAT CTATGCCCAA  GGAATCCTTG TCCTCATTGT TCTCTAATGT GCCCATCATC TCATGAGTCG TCGTCTTGTT CAACATTTTG AATATTAAAT TATCGGCAGC TTTGTGGTCA GAAAAAAACA AAAAACCTAC 
GTGCCGAATT GTTTGGATCC A 

Retrieve as FASTA