Entry information : CberCIIAA02
Entry ID 12218
Creation 2013-05-30 (Nizar Fawal)
Last sequence changes 2015-04-28 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2015-04-28 (Christophe Dunand)
Peroxidase information: CberCIIAA02
Name CberCIIAA02
Class Asco Class II type A     [Orthogroup: CIIAA001]*
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Cucurbitariaceae Cucurbitaria
Organism Cucurbitaria berberidis    [TaxId: 45142 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CberCIIAA02
start..stop
S start..stop
PnoCIIAA02 502 6e-179 6..379 32..406
ApulCIIAA01 327 2e-110 16..331 50..366
ZbreCIIAA 317 2e-106 18..334 66..385
LfluCIIAA03 313 2e-105 6..331 39..367
Literature and cross-references CberCIIAA02
Cluster/Prediction ref. JGI gene:   401496
Protein sequence: CberCIIAA02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   375
PWM (Da):   %s   40533.39  
PI (pH):   %s   4.35
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
DLPDDEQEDE GEEGEKILIG DLVDGSNTPE AQNIANLLLD NKNTKEENFE VGTRPGHEGH TGCETSSDPC CRW*FISQEL TEAFTEADGQ CTRQSIRMGF HDAGTWSSKL AAAGQDYGGA  DGSLVFYGEL TRPENFGLES AAGFAQQL*D KYNVSMVDIV QYMATHATVS CPLGPRVRTY VGRKDATKAA PDGLLPSVHA PADDLVALFA DKTISAHDLT ALLGDHSTST WKSVDSSKAG  FPQDSTPGVW DVNYYNETFK ENENECIYKF E*DVKLSKHA AIASE*QKFV GDQHHWNEDY AQAYLRLSLL GVRNINELKE CTLTLPAQKG TAPKDSDVTA KCPKASSSSL ITSSTTVSSD 
TSTSMSLSTT NVLETNTTS 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomics (at least 1 intron). Several stop in frame. Start and stop are missing.