Entry information : LfluAPx-CcP01
Entry ID 12235
Creation 2013-05-30 (Nizar Fawal)
Last sequence changes 2013-05-30 (Nizar Fawal)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-22 (Catherine Mathe (Scipio))
Peroxidase information: LfluAPx-CcP01
Name LfluAPx-CcP01
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Lentitheciaceae Lentithecium
Organism Lentithecium fluviatile    [TaxId: 690899 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LfluAPx-CcP01
start..stop
S start..stop
HC14APx-CcP02 521 0 1..547 1..545
CgloAPx-CcP03_Naragc5 510 1e-177 9..545 6..539
CgloAPx-CcP03_ST23 506 4e-176 9..545 6..539
CfioAPx-CcP01_PJ7 502 2e-174 15..540 10..533
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 817309..818955 1647  
join(817309..818955)


exon

Literature and cross-references LfluAPx-CcP01
DNA ref. JGI genome:   scaffold_15 (817309..818955)
Cluster/Prediction ref. JGI gene:   42636
Protein sequence: LfluAPx-CcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   549 (526)
PWM (Da):   %s   59747.01 (57446.9) Transmb domain:   %s   i5-27o
PI (pH):   %s   4.98 (4.83) Peptide Signal:   %s   cut: 23 range:23-548
Sequence
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Send to Peroxiscan
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MKSHNFAALA TMPSALLSMV AAGYVWPDKY DYMEDIYMLQ SGFNRMGFID GILSCGFGQR VPGRQNSAEW IRTAYHDIAT ADVEAGTGGL DASIQFETER GENKGSAFNN TFGHFSGYYS  PRSSVSDLLA LAVVGSMAIC GGYEIPLRVG RIDATEAGPM GVPEPQQDLP THTAKFAKQG FNQTEMIELV ACGHTLGSIH GANFPEITKD NSTGQVSHFE YGESATVFDN TVVHEYLASN  TSNLLVAGSN DTLNSDKRIF GADKNVTMNL LSDNTYFQTR CQDVMTRMID TVPKEVVLSD PIIARDIKPY INLLALNSNG SIDFSGYIRV RYGTNTKYPN ADDLSAYLTY TDRNGNNFTK  IISTTRPTWQ AGTGAGFRGY TFVYFEWDTQ LASESGIGSF HIHVTTKSTN TTQEYNNGGN GYPVQDKVLY QMKQSCASYT PNGAVYDGSL TIMAAVRSTE VPGHKQLNLH FDKHVSRQGV 
VLDAFETQIE AFNATGKTLT GYELFKIDGM YIGADSSGTT FSVVLGDTTV IDFKSINALT QQECATIG* 

Retrieve as FASTA  
Remarks complete sequence from genomics (0 intron)
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGTCTC ACAACTTTGC AGCGTTGGCC ACGATGCCGA GCGCTCTCCT ATCTATGGTA GCAGCCGGTT ACGTATGGCC AGACAAATAC GACTATATGG AGGACATTTA CATGCTCCAG  AGCGGCTTCA ACCGAATGGG CTTTATCGAC GGAATATTGA GCTGCGGTTT CGGGCAAAGA GTCCCAGGAA GACAAAACTC GGCAGAGTGG ATCCGGACCG CATATCACGA CATAGCCACC  GCTGACGTAG AAGCGGGAAC GGGTGGTCTC GATGCGTCTA TCCAATTTGA GACCGAAAGG GGCGAGAACA AGGGCTCTGC ATTCAACAAT ACGTTTGGGC ATTTCTCCGG TTACTATTCG  CCACGGTCTT CGGTGTCAGA TTTGTTGGCT CTTGCTGTTG TGGGATCTAT GGCCATCTGC GGTGGTTACG AGATTCCCTT GAGAGTTGGT CGCATCGATG CAACTGAAGC GGGTCCTATG  GGTGTTCCCG AACCCCAGCA GGACCTTCCA ACGCATACGG CCAAGTTTGC AAAGCAAGGT TTTAATCAGA CTGAGATGAT CGAGCTTGTT GCGTGCGGTC ATACACTTGG AAGCATTCAC  GGCGCCAACT TCCCGGAAAT CACCAAAGAC AACTCGACAG GGCAAGTGTC GCACTTTGAG TACGGGGAAT CTGCCACGGT CTTCGACAAT ACGGTTGTAC ACGAGTACCT CGCATCAAAC  ACCTCCAACC TTTTAGTGGC AGGCTCTAAC GACACGCTCA ACTCGGACAA ACGTATCTTC GGCGCTGACA AGAACGTCAC GATGAATCTG CTATCCGATA ATACATACTT CCAAACCCGA  TGCCAGGACG TCATGACGCG CATGATCGAT ACTGTACCTA AGGAAGTTGT CCTCAGCGAC CCGATCATTG CTAGAGACAT CAAGCCATAC ATAAACCTTC TCGCTCTGAA CAGCAATGGA  TCCATCGACT TCTCAGGCTA CATCCGCGTC CGCTACGGCA CCAACACCAA GTACCCCAAC GCAGACGACC TTTCCGCATA CCTCACCTAC ACCGACCGAA ACGGCAACAA TTTCACCAAG  ATCATCTCCA CAACGCGACC AACGTGGCAA GCCGGGACCG GAGCGGGTTT CAGGGGCTAC ACTTTTGTCT ATTTCGAATG GGATACGCAG CTTGCCTCTG AGTCCGGTAT CGGCAGCTTC  CACATTCATG TCACGACCAA ATCCACCAAT ACGACACAAG AGTACAACAA TGGCGGTAAC GGGTATCCAG TCCAGGACAA GGTTCTGTAC CAGATGAAGC AGAGCTGCGC TAGTTACACC  CCGAACGGCG CCGTGTACGA CGGCTCGCTT ACGATCATGG CTGCGGTGCG GAGTACGGAA GTGCCTGGGC ACAAGCAGCT TAATCTGCAC TTTGACAAGC ATGTCTCGAG ACAGGGTGTT  GTGCTTGATG CGTTCGAGAC ACAGATTGAG GCGTTCAACG CTACGGGCAA AACGTTGACT GGCTATGAGT TGTTCAAGAT TGATGGAATG TACATTGGCG CTGATAGTTC GGGTACTACT 
TTTAGTGTTG TGCTTGGAGA TACGACTGTG ATTGATTTCA AGTCGATTAA TGCGCTTACT CAGCAGGAAT GTGCGACGAT TGGGTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGTCTC ACAACTTTGC AGCGTTGGCC ACGATGCCGA GCGCTCTCCT ATCTATGGTA GCAGCCGGTT ACGTATGGCC AGACAAATAC GACTATATGG AGGACATTTA CATGCTCCAG  AGCGGCTTCA ACCGAATGGG CTTTATCGAC GGAATATTGA GCTGCGGTTT CGGGCAAAGA GTCCCAGGAA GACAAAACTC GGCAGAGTGG ATCCGGACCG CATATCACGA CATAGCCACC  GCTGACGTAG AAGCGGGAAC GGGTGGTCTC GATGCGTCTA TCCAATTTGA GACCGAAAGG GGCGAGAACA AGGGCTCTGC ATTCAACAAT ACGTTTGGGC ATTTCTCCGG TTACTATTCG  CCACGGTCTT CGGTGTCAGA TTTGTTGGCT CTTGCTGTTG TGGGATCTAT GGCCATCTGC GGTGGTTACG AGATTCCCTT GAGAGTTGGT CGCATCGATG CAACTGAAGC GGGTCCTATG  GGTGTTCCCG AACCCCAGCA GGACCTTCCA ACGCATACGG CCAAGTTTGC AAAGCAAGGT TTTAATCAGA CTGAGATGAT CGAGCTTGTT GCGTGCGGTC ATACACTTGG AAGCATTCAC  GGCGCCAACT TCCCGGAAAT CACCAAAGAC AACTCGACAG GGCAAGTGTC GCACTTTGAG TACGGGGAAT CTGCCACGGT CTTCGACAAT ACGGTTGTAC ACGAGTACCT CGCATCAAAC  ACCTCCAACC TTTTAGTGGC AGGCTCTAAC GACACGCTCA ACTCGGACAA ACGTATCTTC GGCGCTGACA AGAACGTCAC GATGAATCTG CTATCCGATA ATACATACTT CCAAACCCGA  TGCCAGGACG TCATGACGCG CATGATCGAT ACTGTACCTA AGGAAGTTGT CCTCAGCGAC CCGATCATTG CTAGAGACAT CAAGCCATAC ATAAACCTTC TCGCTCTGAA CAGCAATGGA  TCCATCGACT TCTCAGGCTA CATCCGCGTC CGCTACGGCA CCAACACCAA GTACCCCAAC GCAGACGACC TTTCCGCATA CCTCACCTAC ACCGACCGAA ACGGCAACAA TTTCACCAAG  ATCATCTCCA CAACGCGACC AACGTGGCAA GCCGGGACCG GAGCGGGTTT CAGGGGCTAC ACTTTTGTCT ATTTCGAATG GGATACGCAG CTTGCCTCTG AGTCCGGTAT CGGCAGCTTC  CACATTCATG TCACGACCAA ATCCACCAAT ACGACACAAG AGTACAACAA TGGCGGTAAC GGGTATCCAG TCCAGGACAA GGTTCTGTAC CAGATGAAGC AGAGCTGCGC TAGTTACACC  CCGAACGGCG CCGTGTACGA CGGCTCGCTT ACGATCATGG CTGCGGTGCG GAGTACGGAA GTGCCTGGGC ACAAGCAGCT TAATCTGCAC TTTGACAAGC ATGTCTCGAG ACAGGGTGTT  GTGCTTGATG CGTTCGAGAC ACAGATTGAG GCGTTCAACG CTACGGGCAA AACGTTGACT GGCTATGAGT TGTTCAAGAT TGATGGAATG TACATTGGCG CTGATAGTTC GGGTACTACT 
TTTAGTGTTG TGCTTGGAGA TACGACTGTG ATTGATTTCA AGTCGATTAA TGCGCTTACT CAGCAGGAAT GTGCGACGAT TGGGTAG 

Retrieve as FASTA