Entry information : SjapGPx01
Entry ID 12252
Creation 2013-05-30 (Christophe Dunand)
Last sequence changes 2013-05-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Christophe Dunand)
Peroxidase information: SjapGPx01
Name SjapGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Ascomycota Schizosaccharomycetes Schizosaccharomycetaceae Schizosaccharomyces
Organism Schizosaccharomyces japonicus    [TaxId: 4897 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SjapGPx01
start..stop
S start..stop
SpomGPx01 266 1e-93 1..158 1..158
ScryGPx01 266 3e-93 1..158 1..158
SoctGPx01 263 4e-92 1..158 2..159
KwicGPx01 233 4e-80 1..158 1..159
Literature and cross-references SjapGPx01
DNA ref. GenBank:   AATM01000031.1 (192135..192611)
Protein sequence: SjapGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   158
PWM (Da):   %s   17881.31  
PI (pH):   %s   9.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKIYDFAPL DKKGEPFPFS QLKGKVVLIV NTASKCGFTP QFKGLEALYQ KYKDRGFIII GFPCNQFGNQ DPGTNDEIQS FCQVNYGVTF PILGKIDVNG DKTDPVFKYL KSQKKQLGLE 
RVKWNFEKFL INREGVPVER YSSISKPEHI AKDIESLL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). 5' end could be very long (more than 200 aa), no EST to confirm, and short 5' end confirmed in S.pombe.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACCAAGA TTTATGATTT TGCACCTCTC GACAAGAAGG GAGAGCCCTT CCCCTTTTCT CAATTGAAGG GAAAGGTTGT TTTGATCGTC AACACTGCCA GTAAGTGCGG TTTCACTCCT  CAATTCAAGG GTTTGGAGGC GCTCTACCAA AAGTACAAGG ACCGTGGCTT CATCATTATC GGTTTCCCTT GCAATCAGTT TGGTAACCAG GATCCTGGAA CCAATGACGA GATTCAAAGC  TTCTGCCAAG TGAATTACGG TGTCACATTC CCTATTTTGG GAAAGATTGA TGTCAATGGT GACAAAACAG ATCCTGTGTT CAAATACTTG AAGAGTCAAA AGAAGCAGCT TGGTCTCGAA 
CGCGTCAAGT GGAACTTTGA AAAGTTTCTT ATCAACCGTG AGGGTGTGCC TGTGGAACGC TACTCTAGTA TCAGCAAGCC AGAGCACATT GCTAAGGACA TTGAGAGTCT TCTTTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACCAAGA TTTATGATTT TGCACCTCTC GACAAGAAGG GAGAGCCCTT CCCCTTTTCT CAATTGAAGG GAAAGGTTGT TTTGATCGTC AACACTGCCA GTAAGTGCGG TTTCACTCCT  CAATTCAAGG GTTTGGAGGC GCTCTACCAA AAGTACAAGG ACCGTGGCTT CATCATTATC GGTTTCCCTT GCAATCAGTT TGGTAACCAG GATCCTGGAA CCAATGACGA GATTCAAAGC  TTCTGCCAAG TGAATTACGG TGTCACATTC CCTATTTTGG GAAAGATTGA TGTCAATGGT GACAAAACAG ATCCTGTGTT CAAATACTTG AAGAGTCAAA AGAAGCAGCT TGGTCTCGAA 
CGCGTCAAGT GGAACTTTGA AAAGTTTCTT ATCAACCGTG AGGGTGTGCC TGTGGAACGC TACTCTAGTA TCAGCAAGCC AGAGCACATT GCTAAGGACA TTGAGAGTCT TCTTTAA 

Retrieve as FASTA