Entry information : DcryGPx01
Entry ID 12283
Creation 2013-05-30 (Nizar Fawal)
Last sequence changes 2013-05-30 (Nizar Fawal)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-20 (Catherine Mathe (Scipio))
Peroxidase information: DcryGPx01
Name DcryGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3005]
Taxonomy Eukaryota Fungi Basidiomycota Tremellomycetes Dioszegia
Organism Dioszegia cryoxerica    [TaxId: 603311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value DcryGPx01
start..stop
S start..stop
CgaGPx01 281 2e-99 1..151 1..151
CnGPx01_H99 281 2e-99 1..151 1..151
CnGPx01_JEC21 280 3e-99 1..151 1..151
TmesGPx01_Fries 259 4e-91 1..151 1..151
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 48020..48043 24 N° 2 47889..47970 82 N° 3 47748..47836 89 N° 4 47618..47704 87
N° 5 47489..47572 84 N° 6 47323..47388 66 N° 7 47242..47265 24  
complement(join(47242..47265,47323..47388,47489..47572,47618..47704,47748..47836 ,47889..47970,48020..48043))


exon

Literature and cross-references DcryGPx01
DNA ref. JGI genome:   scaffold_99 (48043..47242)
Cluster/Prediction ref. JGI gene:   282087
Protein sequence: DcryGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   152
PWM (Da):   %s   17024.63  
PI (pH):   %s   6.25
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSDIYSHTVELPKSSLPLAEYKDRTLLFVNVASKCGLTPQYKDLQALHEKYSDKGLVIIGFPCNFKAQEPGTDDEVLQFCQMNYGVTFPIAKKGDVNGEDTQPIWKYLKTHAEPPVQDIDWNFSKFLVKNGKVTFFPARTTKVSDVEAAL*

Retrieve as FASTA  
Remarks complete sequence from genomics (6 introns)
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCGATATCTACTCTCACACCGTGAGAGCATTAATCCCTACAAGACAGCACGCCAGCACTGATATCTCAGGTCGAGCTGCCCAAATCCTCGCTTCCGCTGGCGGAATACAAGGACAG
GACCTTGCTCTTCGTCAATGTGGCCTCTAAGTGTG
GTAAGCCGACTACTTCGACCCTTCGCCAGAAACAGTATGAGCTGACGACCAGGCTTGACACCGCAGTACAAGGATCTACAAGCCT
TGCACGAGAAATACTCAGACAAGGGCTTAGTGATTATTGGGTTCCCATGCAACCAG
GCACGTTCAACTCTTCCCTAGGTTGGCATATCTGACATTGCAGTTCAAAGCTCAGGAGCCCGGA
ACAGATGATGAGGTGCTGCAGTTCTGCCAAATGAATTACGGTGTCACTTTCCCTATCGCCAAGAAG
GCATGTCCTTTGTCATACTTGTGTGGTCGAGCTGACGTTCAACAGGGCGATGTC
AACGGCGAGGACACGCAGCCTATCTGGAAATACCTCAAGACCCACGCTGAGCCGCCTGTGCAGGACATTGATTGG
GTGAGCTTCTTATCCTGCTCGCTGTCTGCCACAGTGGCGACTCCT
GCTGGGAAGGGCCGGGGGAGGTGATTCTCACGAGGAACGTGCTGACAGTTTGCAGAACTTCTCCAAGTTCCTCGTCAAGAACGGCAAGGTCACCTTCTTCCCCGCTCGGACCACCAAAGT
C
GTGAGTCCGCGTCTGCTTCATGTGCAATCTTCGGGGACGCAGCTGACATGTCGACAGAGCGACGTTGAAGCTGCCCTCTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCGATATCTACTCTCACACCGTCGAGCTGCCCAAATCCTCGCTTCCGCTGGCGGAATACAAGGACAGGACCTTGCTCTTCGTCAATGTGGCCTCTAAGTGTGGCTTGACACCGCAG
TACAAGGATCTACAAGCCTTGCACGAGAAATACTCAGACAAGGGCTTAGTGATTATTGGGTTCCCATGCAACCAG
TTCAAAGCTCAGGAGCCCGGAACAGATGATGAGGTGCTGCAGTTC
TGCCAAATGAATTACGGTGTCACTTTCCCTATCGCCAAGAAG
GGCGATGTCAACGGCGAGGACACGCAGCCTATCTGGAAATACCTCAAGACCCACGCTGAGCCGCCTGTGCAGGACATT
GATTGG
AACTTCTCCAAGTTCCTCGTCAAGAACGGCAAGGTCACCTTCTTCCCCGCTCGGACCACCAAAGTCAGCGACGTTGAAGCTGCCCTCTGA

Retrieve as FASTA