Entry information : VpolGPx01
Entry ID 12395
Creation 2013-06-04 (Christophe Dunand)
Last sequence changes 2013-06-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-06-04 (Christophe Dunand)
Peroxidase information: VpolGPx01
Name VpolGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Vanderwaltozyma
Organism Vanderwaltozyma polyspora (Kluyveromyces polysporus)    [TaxId: 36033 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VpolGPx01
start..stop
S start..stop
KwicGPx01 276 3e-97 1..161 1..161
SmiGPx02 274 3e-96 1..161 1..161
SpaGPx02 273 5e-96 1..161 1..161
SpastGPx02 271 2e-95 1..161 1..161
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 226445..226930 486  
complement(join(226445..226930))


exon

Literature and cross-references VpolGPx01
DNA ref. GenBank:   DS480379.1 (226930..226445)
Protein sequence: VpolGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   161
PWM (Da):   %s   18234.31  
PI (pH):   %s   5.35
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSKFYELAPS DKKGEPYSFS QLEGKVILIV NVASKCGFTP QYKELEELYQ KHKDEGLVIL GFPCNQFGHQ EPGSDEEIAQ FCTLNYGVTF PIMKKIEVNG NSVDPVYEFL KSQRAGILGF 
RGIKWNFEKF LVDRKGEVYE RYSSLTKPAS IEGDIEKLLK Q 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAAGT TTTACGAATT AGCACCAAGT GATAAAAAAG GTGAACCATA TTCATTCTCT CAATTAGAAG GCAAGGTTAT CTTGATTGTC AATGTTGCTT CAAAATGTGG TTTCACTCCT  CAATATAAGG AATTGGAAGA ATTATATCAA AAACATAAAG ATGAAGGTTT AGTTATTTTA GGTTTCCCTT GTAATCAGTT TGGTCACCAA GAACCAGGTA GTGATGAAGA AATTGCTCAA  TTTTGTACCT TGAATTATGG TGTCACCTTC CCAATTATGA AGAAGATCGA AGTTAATGGT AACAGTGTAG ACCCAGTTTA TGAATTTTTG AAGAGTCAAA GGGCTGGTAT CCTAGGTTTC  AGAGGCATTA AATGGAATTT TGAAAAATTC TTGGTCGACA GAAAAGGTGA AGTTTATGAA AGATATTCTT CTTTGACAAA ACCAGCTTCA ATTGAAGGTG ACATCGAAAA ATTGTTAAAA 
CAATAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAAGT TTTACGAATT AGCACCAAGT GATAAAAAAG GTGAACCATA TTCATTCTCT CAATTAGAAG GCAAGGTTAT CTTGATTGTC AATGTTGCTT CAAAATGTGG TTTCACTCCT  CAATATAAGG AATTGGAAGA ATTATATCAA AAACATAAAG ATGAAGGTTT AGTTATTTTA GGTTTCCCTT GTAATCAGTT TGGTCACCAA GAACCAGGTA GTGATGAAGA AATTGCTCAA  TTTTGTACCT TGAATTATGG TGTCACCTTC CCAATTATGA AGAAGATCGA AGTTAATGGT AACAGTGTAG ACCCAGTTTA TGAATTTTTG AAGAGTCAAA GGGCTGGTAT CCTAGGTTTC  AGAGGCATTA AATGGAATTT TGAAAAATTC TTGGTCGACA GAAAAGGTGA AGTTTATGAA AGATATTCTT CTTTGACAAA ACCAGCTTCA ATTGAAGGTG ACATCGAAAA ATTGTTAAAA 
CAATAA 

Retrieve as FASTA