Entry information : SpaGPx01
Entry ID 12407
Creation 2013-06-04 (Christophe Dunand)
Last sequence changes 2013-06-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-06-04 (Christophe Dunand)
Peroxidase information: SpaGPx01
Name SpaGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Saccharomyces
Organism Saccharomyces paradoxus    [TaxId: 27291 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpaGPx01
start..stop
S start..stop
SceGPx02 310 8e-111 1..162 1..162
SpastGPx03 310 8e-111 1..162 1..162
SkuGPx01 306 3e-109 1..162 1..162
SmiGPx03 304 3e-108 1..162 1..162
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 16131..16619 489  
join(16131..16619)


exon

Literature and cross-references SpaGPx01
DNA ref. GenBank:   AABY01000013.1 (16131..16619)
Protein sequence: SpaGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   163
PWM (Da):   %s   18483.42  
PI (pH):   %s   7.88
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSTSFYDLEC QDKKGEIFKF DQLRGKVVLI VNVASKCGFT PQYKELEELY KKYQDKGLVI LGFPCNQFGK QEPGSDEQIT EFCQLNYGVT FPIMKKIDVN GNNADPVYNY LKSQKAGLLG 
FKGIKWNFEK FLVDFNGNVV QRFSSLTKPS SLDQEIQSLL SK* 

Retrieve as FASTA  
Remarks complete sequence from genomic (no intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCACTT CTTTTTATGA TTTAGAATGC CAAGACAAGA AAGGTGAAAT TTTCAAGTTT GATCAACTGA GGGGCAAAGT AGTTCTCATA GTCAACGTTG CCTCCAAGTG CGGCTTCACC  CCACAGTATA AAGAATTGGA AGAACTATAC AAAAAATACC AAGATAAGGG GCTTGTTATT TTGGGGTTCC CATGCAATCA GTTCGGGAAG CAAGAACCAG GTTCTGATGA GCAAATTACG  GAATTCTGCC AATTGAATTA TGGTGTTACA TTCCCCATTA TGAAGAAAAT TGATGTTAAC GGAAACAATG CTGATCCCGT TTATAATTAT TTGAAAAGCC AAAAAGCAGG TTTGCTAGGT  TTCAAGGGTA TTAAATGGAA TTTTGAGAAG TTTTTAGTGG ATTTCAATGG TAATGTTGTC CAAAGGTTTT CTTCATTAAC AAAACCATCG TCCTTGGATC AAGAAATCCA AAGCCTGCTA 
AGTAAATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCACTT CTTTTTATGA TTTAGAATGC CAAGACAAGA AAGGTGAAAT TTTCAAGTTT GATCAACTGA GGGGCAAAGT AGTTCTCATA GTCAACGTTG CCTCCAAGTG CGGCTTCACC  CCACAGTATA AAGAATTGGA AGAACTATAC AAAAAATACC AAGATAAGGG GCTTGTTATT TTGGGGTTCC CATGCAATCA GTTCGGGAAG CAAGAACCAG GTTCTGATGA GCAAATTACG  GAATTCTGCC AATTGAATTA TGGTGTTACA TTCCCCATTA TGAAGAAAAT TGATGTTAAC GGAAACAATG CTGATCCCGT TTATAATTAT TTGAAAAGCC AAAAAGCAGG TTTGCTAGGT  TTCAAGGGTA TTAAATGGAA TTTTGAGAAG TTTTTAGTGG ATTTCAATGG TAATGTTGTC CAAAGGTTTT CTTCATTAAC AAAACCATCG TCCTTGGATC AAGAAATCCA AAGCCTGCTA 
AGTAAATGA 

Retrieve as FASTA