Entry information : ChigAPx-CcP03
Entry ID 12425
Creation 2013-06-04 (Christophe Dunand)
Last sequence changes 2016-02-17 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-17 (Achraf Jemmat)
Peroxidase information: ChigAPx-CcP03
Name ChigAPx-CcP03
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP006]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Glomerellaceae Colletotrichum
Organism Colletotrichum higginsianum    [TaxId: 80884 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ChigAPx-CcP03
start..stop
S start..stop
CfioAPx-CcP03_MH18 704 0 1..436 77..509
CfioAPx-CcP03_PJ7 702 0 1..436 77..509
CgloAPx-CcP03_ST23 477 3e-166 1..430 97..530
CgloAPx-CcP03_Naragc5 476 4e-166 1..430 97..530
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3219..4529 1311  
complement(join(3219..4529))


exon

Literature and cross-references ChigAPx-CcP03
DNA ref. GenBank:   CACQ02003204.1 (4442..2978)
Protein sequence: ChigAPx-CcP03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   436
PWM (Da):   %s   46402  
PI (pH):   %s   4.63
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ENGGAAFNNT FSFFSNLYSV RASASDLLAM SVVVANAGCG GARMPFRAGR IDAVEAGPAG VPEPDTPMDT TRSTFAKAGF SESEMIALVA CGHTLGGVHS RNNPHITGLD PTPDTVTKFD  STFDDFDNKI ATEYLKGNTS NPLVVGKNET LNSDKRIFAS DGNKTIQDLG CTKNGFKTAC ADVFTRMIDT VPSAVQLTEP IEAVDIKPYV GLSLGENGSI AFSGRVRVRT TEDTGRDVSD  LTVHLSFADR NGEGTVTVPT TLDEGGVTYG LWGETFVWYQ FETVIPAASG ISKFVVHLTN PSTNATAxYR NGGGSGYPLD DALLYQASAS CVDRTSVNNE RTFTVTAAVR EDRAADPVKM 
ELVRLVRRQG IIHRQLVVET VDLAATADEG ESGYVTFQGQ IQLPTNGWST SFDLVLGGGE KEVRLDFLKT QTCPRV 

Retrieve as FASTA  
Remarks Incorrect prediction from NCBI (5'end is probably missing (contig border), extra intron (due to n in the sequence) and extra exon in 3').
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GAGAACGGCG GCGCCGCCTT CAACAACACC TTCAGCTTCT TCAGCAACCT CTACTCGGTC CGGGCCTCGG CTTCGGATCT GCTGGCCATG AGCGTCGTCG TCGCCAACGC GGGTTGTGGT  GGCGCGCGAA TGCCGTTCCG CGCGGGGCGC ATTGATGCCG TCGAGGCCGG TCCCGCGGGC GTGCCGGAAC CGGATACGCC GATGGACACG ACGCGGAGCA CGTTCGCCAA GGCCGGCTTC  AGCGAAAGCG AGATGATTGC CCTGGTGGCG TGCGGCCATA CGCTCGGCGG CGTGCACAGC AGGAACAACC CGCACATCAC GGGGCTCGAC CCGACGCCGG ATACGGTAAC CAAGTTCGAC  AGCACCTTTG ACGACTTTGA CAACAAGATC GCGACGGAGT ACCTAAAGGG CAACACGTCG AACCCGCTGG TTGTCGGAAA GAACGAGACG CTCAACTCGG ACAAGCGCAT CTTTGCGTCG  GACGGCAACA AGACGATCCA GGACCTTGGG TGCACCAAGA ACGGCTTCAA GACGGCATGC GCCGACGTCT TCACGCGCAT GATCGACACG GTGCCCTCGG CGGTGCAGCT GACGGAGCCC  ATTGAGGCCG TCGACATCAA GCCCTACGTC GGGTTGTCGC TGGGCGAGAA CGGGAGCATT GCATTCAGTG GCCGGGTCCG CGTCAGGACG ACTGAAGACA CCGGGCGTGA CGTGAGCGAC  TTGACGGTCC ACCTGAGCTT CGCGGACCGC AACGGCGAGG GCACCGTCAC GGTGCCGACG ACGCTCGACG AGGGGGGCGT GACGTACGGC CTATGGGGCG AGACGTTCGT CTGGTATCAG  TTTGAGACGG TCATTCCGGC CGCGAGCGGC ATCAGCAAGT TTGTCGTCCA CCTGACGAAC CCCTCCACCA ACGCAACGGC GGKGTACAGG AACGGCGGTG GCAGCGGGTA CCCGCTGGAC  GACGCGCTGC TGTACCAGGC GTCCGCGTCG TGCGTCGACC GGACGAGCGT GAACAACGAG CGCACCTTCA CCGTCACGGC CGCGGTGCGG GAGGACCGCG CCGCGGACCC TGTGAAGATG  GAGCTCGTGC GTCTAGTGAG GCGGCAGGGC ATCATTCATC GGCAGCTCGT GGTCGAGACC GTTGATCTGG CGGCGACGGC GGACGAGGGG GAGAGCGGGT ACGTCACCTT CCAGGGGCAG 
ATACAGCTTC CGACGAACGG GTGGAGCACG AGCTTCGATC TCGTTCTGGG AGGGGGCGAG AAGGAGGTCA GACTCGACTT CTTGAAGACG CAAACGTGTC CGCGCGTTTG A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GAGAACGGCG GCGCCGCCTT CAACAACACC TTCAGCTTCT TCAGCAACCT CTACTCGGTC CGGGCCTCGG CTTCGGATCT GCTGGCCATG AGCGTCGTCG TCGCCAACGC GGGTTGTGGT  GGCGCGCGAA TGCCGTTCCG CGCGGGGCGC ATTGATGCCG TCGAGGCCGG TCCCGCGGGC GTGCCGGAAC CGGATACGCC GATGGACACG ACGCGGAGCA CGTTCGCCAA GGCCGGCTTC  AGCGAAAGCG AGATGATTGC CCTGGTGGCG TGCGGCCATA CGCTCGGCGG CGTGCACAGC AGGAACAACC CGCACATCAC GGGGCTCGAC CCGACGCCGG ATACGGTAAC CAAGTTCGAC  AGCACCTTTG ACGACTTTGA CAACAAGATC GCGACGGAGT ACCTAAAGGG CAACACGTCG AACCCGCTGG TTGTCGGAAA GAACGAGACG CTCAACTCGG ACAAGCGCAT CTTTGCGTCG  GACGGCAACA AGACGATCCA GGACCTTGGG TGCACCAAGA ACGGCTTCAA GACGGCATGC GCCGACGTCT TCACGCGCAT GATCGACACG GTGCCCTCGG CGGTGCAGCT GACGGAGCCC  ATTGAGGCCG TCGACATCAA GCCCTACGTC GGGTTGTCGC TGGGCGAGAA CGGGAGCATT GCATTCAGTG GCCGGGTCCG CGTCAGGACG ACTGAAGACA CCGGGCGTGA CGTGAGCGAC  TTGACGGTCC ACCTGAGCTT CGCGGACCGC AACGGCGAGG GCACCGTCAC GGTGCCGACG ACGCTCGACG AGGGGGGCGT GACGTACGGC CTATGGGGCG AGACGTTCGT CTGGTATCAG  TTTGAGACGG TCATTCCGGC CGCGAGCGGC ATCAGCAAGT TTGTCGTCCA CCTGACGAAC CCCTCCACCA ACGCAACGGC GGKGTACAGG AACGGCGGTG GCAGCGGGTA CCCGCTGGAC  GACGCGCTGC TGTACCAGGC GTCCGCGTCG TGCGTCGACC GGACGAGCGT GAACAACGAG CGCACCTTCA CCGTCACGGC CGCGGTGCGG GAGGACCGCG CCGCGGACCC TGTGAAGATG  GAGCTCGTGC GTCTAGTGAG GCGGCAGGGC ATCATTCATC GGCAGCTCGT GGTCGAGACC GTTGATCTGG CGGCGACGGC GGACGAGGGG GAGAGCGGGT ACGTCACCTT CCAGGGGCAG 
ATACAGCTTC CGACGAACGG GTGGAGCACG AGCTTCGATC TCGTTCTGGG AGGGGGCGAG AAGGAGGTCA GACTCGACTT CTTGAAGACG CAAACGTGTC CGCGCGTTTG A 

Retrieve as FASTA