Entry information : RsoGPx02_GMI1000
Entry ID 12486
Creation 2013-08-13 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: RsoGPx02_GMI1000
Name RsoGPx02_GMI1000
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3008]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoGPx02_GMI1000
start..stop
S start..stop
CtaiGPx02_LMG19424 242 5e-82 66..230 44..208
PwGPx01 153 9e-47 66..220 18..172
ScocGPx01 145 4e-44 86..229 24..171
RsoGPx01_GMI1000 142 4e-43 91..232 19..164
Literature and cross-references RsoGPx02_GMI1000
Protein ref. UniProtKB:   Q8Y2M8
DNA ref. GenBank:   NC_003295.1 (339594..338893)
Protein sequence: RsoGPx02_GMI1000
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   233
PWM (Da):   %s   25154.18 Transmb domain:   %s   i26-48o
PI (pH):   %s   9.65
Sequence
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Send to Peroxiscan
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MSSPSLAAPA LARARDRLAR RRTAGVLSRH HLLIIAIAIV IAIIALLLPR TCHAAAGAQA APAPQPAAAG PCPTALDFRV RRLQDDAPQN LCQYAGRVVL VVNTASYCGY TYQYEGLEAL 
YARFRDKGLT VLGFPSNDFE QEPGTGKQIA DFCYNTYGVK FPMFSKTSVV GPAASPLYHW LAQQTGQPPK WNFHKYLLDR SGRVVAVYPS KVEPGDPALI KRIDALLAEP APR 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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ATGTCGTCGC CTTCCCTCGC CGCGCCTGCC CTTGCCCGCG CACGCGACCG GCTCGCCCGC CGGCGCACTG CGGGCGTGCT GAGCCGGCAT CACCTGCTGA TCATCGCGAT CGCCATCGTC  ATTGCGATCA TCGCGCTGCT GCTGCCGCGC ACCTGCCACG CGGCCGCCGG CGCCCAGGCC GCCCCGGCAC CACAGCCCGC CGCCGCGGGC CCCTGCCCGA CCGCCCTCGA TTTCCGCGTC  AGGCGCCTGC AGGACGACGC ACCGCAGAAC CTGTGCCAGT ACGCCGGCCG CGTGGTGCTG GTGGTCAACA CCGCCAGCTA TTGCGGCTAT ACCTACCAGT ACGAAGGGCT CGAAGCGCTG  TACGCCAGGT TCCGCGACAA GGGACTGACC GTGCTGGGCT TCCCCTCCAA CGACTTCGAG CAGGAGCCGG GCACCGGCAA GCAGATCGCC GACTTCTGCT ACAACACGTA CGGCGTGAAG  TTCCCGATGT TCTCGAAGAC CTCGGTGGTG GGGCCGGCGG CGTCGCCGCT CTATCACTGG CTCGCCCAGC AGACCGGGCA GCCGCCCAAG TGGAACTTCC ACAAGTACCT GCTGGACCGC 
AGCGGCCGCG TAGTGGCGGT GTACCCGAGC AAGGTCGAGC CGGGCGATCC GGCCCTCATC AAGCGCATCG ACGCCCTGCT CGCCGAACCG GCGCCCCGCT GA 

Retrieve as FASTA  
CDS
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ATGTCGTCGC CTTCCCTCGC CGCGCCTGCC CTTGCCCGCG CACGCGACCG GCTCGCCCGC CGGCGCACTG CGGGCGTGCT GAGCCGGCAT CACCTGCTGA TCATCGCGAT CGCCATCGTC  ATTGCGATCA TCGCGCTGCT GCTGCCGCGC ACCTGCCACG CGGCCGCCGG CGCCCAGGCC GCCCCGGCAC CACAGCCCGC CGCCGCGGGC CCCTGCCCGA CCGCCCTCGA TTTCCGCGTC  AGGCGCCTGC AGGACGACGC ACCGCAGAAC CTGTGCCAGT ACGCCGGCCG CGTGGTGCTG GTGGTCAACA CCGCCAGCTA TTGCGGCTAT ACCTACCAGT ACGAAGGGCT CGAAGCGCTG  TACGCCAGGT TCCGCGACAA GGGACTGACC GTGCTGGGCT TCCCCTCCAA CGACTTCGAG CAGGAGCCGG GCACCGGCAA GCAGATCGCC GACTTCTGCT ACAACACGTA CGGCGTGAAG  TTCCCGATGT TCTCGAAGAC CTCGGTGGTG GGGCCGGCGG CGTCGCCGCT CTATCACTGG CTCGCCCAGC AGACCGGGCA GCCGCCCAAG TGGAACTTCC ACAAGTACCT GCTGGACCGC 
AGCGGCCGCG TAGTGGCGGT GTACCCGAGC AAGGTCGAGC CGGGCGATCC GGCCCTCATC AAGCGCATCG ACGCCCTGCT CGCCGAACCG GCGCCCCGCT GA 

Retrieve as FASTA